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Image Search Results
Journal: Translational Cancer Research
Article Title: A circulating microRNA-based diagnostic model for breast cancer, in which the miR-139-3p/RPA2 axis regulates the sensitivity to DNA-damaging agents
doi: 10.21037/tcr-2025-1-2592
Figure Lengend Snippet: MiR-139-3p targets RPA2 to enhance DNA damage sensitivity in breast cancer cells. (A) Venn diagram of the miR-139-3p target genes and DSB response genes. (B) The relative messenger RNA level of five potential targets in the miR-139-3p in MDA-MB-231 and MCF-7 cells transfected with NC or miR-139-3p mimics. (C) Western blot of RPA2 in the cells transfected with NC or miR-139-3p mimics. (D) The relative Firefly/Renilla luciferase activity in the 293T cells transfected with the luciferase vector containing wt or mut RPA2 3’UTR luciferase plasmids, and NC or miR-139-3p mimics. (E) Stable overexpression of RPA2 -3Flag in BC cells. (F,G) IR colony formation ability of the (F) MDA-MB-231 and (G) MCF-7 cells stably overexpressing RPA2 and transfected with miR-139-3p mimics and stained with crystal violet. 1× magnification. (H,I) Cisplatin sensitivity MTS assays of the (H) MDA-MB-231 and (I) MCF-7 cells in different groups. (J) Schematic of HR repair reporter assays (upper). The HR repair efficiency of the miR-139-3p overexpression group and the co-overexpression of the RPA2 group were measured by flow cytometry, with siBRCA1 as a positive control. (K) Schematic of NHEJ reporter assays (upper). The NHEJ efficiency of the miR-139-3p overexpression group and the co-overexpression of the RPA2 group were measured by flow cytometry, with si53BP1 as a positive control. (L) gH2AX foci immunostained for gH2AX (green) and counterstained with DAPI (blue) at 12 hours post-IR in the MDA-MB-231 cells. The gH2AX foci numbers were counted from a minimum of 150 cells. Scale bar: 10 μm. (M) RAD51 foci in the S phase immunostained for RAD51 (red) and counterstained with DAPI (blue) at 12 hours post-IR in the MDA-MB-231 cells. RAD51 foci numbers were counted from a minimum of 150 cells. Scale bar: 10 mm. ns, non-significant; *, P<0.05; **, P<0.01; ***, P<0.001. DAPI, 4’,6-diamidino-2-phenylindole; DSB, double-strand break; GEP, gene editing plasmid; GFP, green fluorescent protein; gH2AX, phosphorylated H2AX; HR, homologous recombination; iGFP, internal GFP reporter; IR, irradiation; mut, mutant type; NC, negative control; NHEJ, non-homologous end joining; wt, wild type; UTR, untranslated region.
Article Snippet: The following antibodies were used: anti- gH2AX (Millipore, Massachusetts, USA, 05-636), anti-β-actin (Servicebio, Wuhan, China, GB12001),
Techniques: Transfection, Western Blot, Luciferase, Activity Assay, Plasmid Preparation, Over Expression, Stable Transfection, Staining, Flow Cytometry, Positive Control, Homologous Recombination, Irradiation, Mutagenesis, Negative Control, Non-Homologous End Joining
Journal: Translational Cancer Research
Article Title: A circulating microRNA-based diagnostic model for breast cancer, in which the miR-139-3p/RPA2 axis regulates the sensitivity to DNA-damaging agents
doi: 10.21037/tcr-2025-1-2592
Figure Lengend Snippet: The efficacy of the combination of miR-139-3p and cisplatin in vivo . (A) Schematic diagram of the construction and treatment of the xenograft model in the BALB/c nude mice. (B) Representative images of nude mice with xenograft tumors in each group. (C) Growth curve of xenograft tumors in nude mice from different groups. (D) IHC staining and analysis of the RPA2 protein in xenograft tumor. 20× magnification. (E) IHC staining and analysis of the Ki-67 protein in xenograft tumors. 1× magnification. *, P<0.05; **, P<0.01; ***, P<0.001. IHC, immunohistochemistry; NC, negative control; PBS, phosphate-buffered saline.
Article Snippet: The following antibodies were used: anti- gH2AX (Millipore, Massachusetts, USA, 05-636), anti-β-actin (Servicebio, Wuhan, China, GB12001),
Techniques: In Vivo, Immunohistochemistry, Negative Control, Saline
Journal: PLoS ONE
Article Title: Genome-Wide Association Study Identifies Single Nucleotide Polymorphism in DYRK1A Associated with Replication of HIV-1 in Monocyte-Derived Macrophages
doi: 10.1371/journal.pone.0017190
Figure Lengend Snippet: SNPs ( p <5×10 −5 ) associated with in vitro HIV-1 replication in monocyte-derived macrophages.
Article Snippet: ABI TaqMan® SNP genotyping assays were used to genotype DNA from the
Techniques: In Vitro
Journal: PLoS ONE
Article Title: Genome-Wide Association Study Identifies Single Nucleotide Polymorphism in DYRK1A Associated with Replication of HIV-1 in Monocyte-Derived Macrophages
doi: 10.1371/journal.pone.0017190
Figure Lengend Snippet: The negative association between the rs12483205 minor allele and Gag p24 levels in MDM culture supernatant 14 days after inoculation with HIV-1, was found to match with the results from the genome-wide association study. Open circles represent results from donors with the CCR5 Δ32 wild-type genotype, filled circles from donors with the CCR5 wt/ Δ32 heterozygous genotype. MAJ, homozygous for the major allele; HZ, heterozygote; MIN, homozygous for the minor allele.
Article Snippet: ABI TaqMan® SNP genotyping assays were used to genotype DNA from the
Techniques: GWAS
Journal: PLoS ONE
Article Title: Genome-Wide Association Study Identifies Single Nucleotide Polymorphism in DYRK1A Associated with Replication of HIV-1 in Monocyte-Derived Macrophages
doi: 10.1371/journal.pone.0017190
Figure Lengend Snippet: Results ( p values) for association testing using the additive analysis model, between disease progression or viral load and the SNPs in DYRK1A , PDE8A , UBR7 , MOAP1 and SPOCK3 .
Article Snippet: ABI TaqMan® SNP genotyping assays were used to genotype DNA from the
Techniques: Biomarker Discovery
Journal: PLoS ONE
Article Title: Genome-Wide Association Study Identifies Single Nucleotide Polymorphism in DYRK1A Associated with Replication of HIV-1 in Monocyte-Derived Macrophages
doi: 10.1371/journal.pone.0017190
Figure Lengend Snippet: Untranslated regions (UTR) are shown as open blocks, whereas exons are shown as filled blocks. SNP rs12483205 lies in close proximity to a part of the 5′ UTR unique for splice variant 3.
Article Snippet: ABI TaqMan® SNP genotyping assays were used to genotype DNA from the
Techniques: Variant Assay