|
Thermo Fisher
gene exp pde8a mm01315378 m1 Gene Exp Pde8a Mm01315378 M1, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more https://www.bioz.com/product/pde8a/Gene+Exp%2E+Pde8a%2C+Mm01315378_m1/pm32992747-342-34--1 Average 90 stars, based on 1 article reviews
gene exp pde8a mm01315378 m1 - by Bioz Stars,
2026-10
90/100 stars
|
Buy from Supplier |
|
Proteintech
anti pde8a Anti Pde8a, supplied by Proteintech, used in various techniques. Bioz Stars score: 92/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more https://www.bioz.com/product/pde8a/PDE8A+Antibody/pmc06713761-226-23-24 Average 92 stars, based on 1 article reviews
anti pde8a - by Bioz Stars,
2026-10
92/100 stars
|
Buy from Supplier |
|
Santa Cruz Biotechnology
anti pde8a antibody Anti Pde8a Antibody, supplied by Santa Cruz Biotechnology, used in various techniques. Bioz Stars score: 91/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more https://www.bioz.com/product/pde8a/PDE8A+Antibody/pmc03310417-238-19-22 Average 91 stars, based on 1 article reviews
anti pde8a antibody - by Bioz Stars,
2026-10
91/100 stars
|
Buy from Supplier |
|
Santa Cruz Biotechnology
lentiviral particles expressing pde8a shrna Lentiviral Particles Expressing Pde8a Shrna, supplied by Santa Cruz Biotechnology, used in various techniques. Bioz Stars score: 88/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more https://www.bioz.com/product/pde8a/PDE8A+shRNA+(m)+Lentiviral+Particles/10__1165_slash_rcmb__2017___0294oc-57-0-8 Average 88 stars, based on 1 article reviews
lentiviral particles expressing pde8a shrna - by Bioz Stars,
2026-10
88/100 stars
|
Buy from Supplier |
|
OriGene
pde8a overexpression ![]() Pde8a Overexpression, supplied by OriGene, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more https://www.bioz.com/product/pde8a/PDE8A+(NM_002605)+Human+Tagged+ORF+Clone/pm25295610-131-2-26 Average 90 stars, based on 1 article reviews
pde8a overexpression - by Bioz Stars,
2026-10
90/100 stars
|
Buy from Supplier |
|
Atlas Antibodies
anti pde8a ![]() Anti Pde8a, supplied by Atlas Antibodies, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more https://www.bioz.com/product/pde8a/Anti-PDE8A/pmc09585345-48-9-10 Average 93 stars, based on 1 article reviews
anti pde8a - by Bioz Stars,
2026-10
93/100 stars
|
Buy from Supplier |
|
OriGene
myc tagged pde8a ![]() Myc Tagged Pde8a, supplied by OriGene, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more https://www.bioz.com/product/pde8a/PDE8A+(NM_001243137)+Human+Tagged+ORF+Clone/pm21920574-218-9-11 Average 90 stars, based on 1 article reviews
myc tagged pde8a - by Bioz Stars,
2026-10
90/100 stars
|
Buy from Supplier |
|
Thermo Fisher
gene exp pde8a hs01079617 m1 ![]() Gene Exp Pde8a Hs01079617 M1, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 92/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more https://www.bioz.com/product/pde8a/Gene+Exp%2E+PDE8A%2C+Hs01079617_m1/bio_rxiv__2023__01__18__524585-266-37-10 Average 92 stars, based on 1 article reviews
gene exp pde8a hs01079617 m1 - by Bioz Stars,
2026-10
92/100 stars
|
Buy from Supplier |
|
Thermo Fisher
gene exp pde8a hs00400174 m1 ![]() Gene Exp Pde8a Hs00400174 M1, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more https://www.bioz.com/product/pde8a/Gene+Exp%2E+pde8a+hs00400174+m1/us11873531-287-28--1 Average 93 stars, based on 1 article reviews
gene exp pde8a hs00400174 m1 - by Bioz Stars,
2026-10
93/100 stars
|
Buy from Supplier |
|
Thermo Fisher
copy number variation pde8a hs03902365 cn ![]() Copy Number Variation Pde8a Hs03902365 Cn, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 85/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more https://www.bioz.com/product/pde8a/Copy+Number+Variation+PDE8A%2C+Hs03902365_cn/pmc03896225-124-64--1 Average 85 stars, based on 1 article reviews
copy number variation pde8a hs03902365 cn - by Bioz Stars,
2026-10
85/100 stars
|
Buy from Supplier |
|
BPS Bioscience
camp for pde8a ![]() Camp For Pde8a, supplied by BPS Bioscience, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more https://www.bioz.com/product/pde8a/PDE8A+Assay+Kit/pmc03012454-95-31-34 Average 94 stars, based on 1 article reviews
camp for pde8a - by Bioz Stars,
2026-10
94/100 stars
|
Buy from Supplier |
|
GenScript corporation
pde8a – c-raf disrupter ![]() Pde8a – C Raf Disrupter, supplied by GenScript corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more https://www.bioz.com/product/pde8a/pde8a+++c+raf+disrupter/pmc06434832-45-2-19 Average 90 stars, based on 1 article reviews
pde8a – c-raf disrupter - by Bioz Stars,
2026-10
90/100 stars
|
Buy from Supplier |
Image Search Results
Journal: PloS one
Article Title: Phosphodiesterase 8a supports HIV-1 replication in macrophages at the level of reverse transcription.
doi: 10.1371/journal.pone.0109673
Figure Lengend Snippet: Figure 1. PDE8A expression during macrophage differentiation and polarisation. (A) PDE8A mRNA expression in freshly isolated monocytes and macrophages cultured for 7 days from 32 donors. (B) PDE8A mRNA expression in freshly isolated monocytes and macrophages from 4 donors cultured in the absence or presence of IFN-a (250 U/ml), IFN-b (250 U/ml), IFN-c (2501U/ml), IL-4 (10 ng/ml), or IL-10 (100 U/ml) for 7 days. Statistical differences were analyzed using a paired T test: *p,0.05, **p,0.01, ***p,0.001. doi:10.1371/journal.pone.0109673.g001
Article Snippet: Plasmids For
Techniques: Expressing, Isolation, Cell Culture
Journal: PloS one
Article Title: Phosphodiesterase 8a supports HIV-1 replication in macrophages at the level of reverse transcription.
doi: 10.1371/journal.pone.0109673
Figure Lengend Snippet: Figure 2. Regulation of PDE8A expression by miR-145-5p during differentiation of monocytes into macrophages. Confirmation of PDE8A mRNA (A) and miR-145-5p (B) expression during differentiation of monocytes into macrophages obtained from 8 donors. PDE8A mRNA or miR- 145-5p expression during differentiation was compared with the expression at day 0 by using a paired T test: *p,0.05, **p,0.01, ***p,0.001. (C) Schematic overview of the PDE8A mRNA transcript 1 including the miR-145-5p binding site between base pair 3412 and 3435. (D) Expression levels of miR-145-5p determined by qPCR in HEK293T cells 2 days after transfection with an empty vector control or a vector containing a miR-145-5p expression cassette (n = 2, mean and SD). (E) Direct interaction between miR-145-5p and its target sequence in the PDE8A mRNA transcript was tested by co-transfection of p-hEF1a-miR-145-5p or an empty vector control and p-hEF1a-Luc-39UTR PDE8A. Luciferase activity was measured 2 days post- transfection (n = 3, mean and SD). Statistical differences were analyzed using an un-paired T test: *p,0.05, **p,0.01, ***p,0.001. doi:10.1371/journal.pone.0109673.g002
Article Snippet: Plasmids For
Techniques: Expressing, Binding Assay, Transfection, Plasmid Preparation, Control, Sequencing, Cotransfection, Luciferase, Activity Assay
Journal: PloS one
Article Title: Phosphodiesterase 8a supports HIV-1 replication in macrophages at the level of reverse transcription.
doi: 10.1371/journal.pone.0109673
Figure Lengend Snippet: Figure 3. PDE8A supports HIV-1 replication at the level of reverse transcription. (A) HEK293T cells were transfected with different concentrations of pCMV6-PDE8A or an empty vector control. PDE8A expression was analyzed forty-eight hours after transfection by western blot. (B) HEK293T cells were transfected with different concentrations of pCMV6-PDE8A or an empty vector control and infected with VSV-G/NL4-3.Luc 48 hours after transfection. Luciferase activity was measured 2 days after infection (n = 3, mean and SD). (C) HEK293T cells were transfected with different concentrations of pCMV6-PDE8A or an empty vector control and infected with VSV-G/NL4-3-Ba-L 48 hours after transfection. Proviral DNA levels were analyzed forty-eight hours after infection by qPCR. Proviral DNA levels are expressed relative to the control after correction for b-actin levels in the same sample (n = 3, mean and SD). (D) HEK293T cells were transfected with 1 mg of pCMV6-PDE8A or 1 mg of empty vector control and infected with VSV-G/NL4-3-Ba-L 48 hours after transfection. R/U5 and Pol proviral DNA levels were analyzed by qPCR during 48 hours post-infection. R/U5 and Pol levels are expressed as the ratio of the expression in cells transfected with pCMV-PDE8A divided by the expression in cells that were transfected with the empty vector control and corrected for b-actin levels (n = 2, mean and SD). (E) HEK293T cells were transfected with 1 mg of pCMV6-PDE8A or 1 mg of the empty vector control and infected with VSV-G/NL4-3-Ba-L 48 hours after transfection. Integrated HIV-1 copies were determined 48 hours post infection by Alu-PCR and expressed relative to the control after correction for b-actin levels in the same sample (n = 2, mean and SD). Statistical differences were analyzed using an un-paired T test: *p,0.05, **p,0.01, ***p,0.001. doi:10.1371/journal.pone.0109673.g003
Article Snippet: Plasmids For
Techniques: Reverse Transcription, Transfection, Plasmid Preparation, Control, Expressing, Western Blot, Infection, Luciferase, Activity Assay
Journal: PloS one
Article Title: Phosphodiesterase 8a supports HIV-1 replication in macrophages at the level of reverse transcription.
doi: 10.1371/journal.pone.0109673
Figure Lengend Snippet: Figure 4. The effect of PDE8A knockdown on HIV-1 replication in macrophages. (A) To analyze the effect of PDE8A knockdown on HIV-1 replication in macrophages, monocytes from 4 donors were cultured for 5 days and transduced with lentiviral vectors expressing shRNA control or two shRNA’s targeting PDE8A. Forty-eight hours after the lentiviral transduction, macrophages were infected with VSV-G/NL4-3.Luc and luciferase activity was measured at day 2 after infection. The results are given as the mean fold luciferase expression from 4 donors, relative to the medium control. UT: Untransduced control. Statistical differences were analyzed by mixed linear model, repeated covariance: diagonal (IBM SPSS Statistics 20). (B) To determine the effect of PDE8A knockdown on Pol proviral DNA levels, monocytes in which PDE8A was downregulated by lentiviral transduction were infected with VSV-G/NL4-3-Ba-L. Pol proviral DNA levels were analyzed by qPCR during 48 hours post-infection and expressed relative to b-actin. Results are given as mean and sd from 2 donors. (C) Monocytes in which PDE8A was downregulated by lentiviral transduction were infected with VSV-G/NL4-3-Ba-L. Two days post-infection, proviral DNA levels were analyzed by qPCR for Pol. Proviral DNA levels are expressed relative to the control after correction to b-actin for input. Results shown are representative for 3 donors. Inact.: Inactivated virus. Statistical differences were analyzed using a paired T test: *p,0.05, **p,0.01, ***p,0.001. doi:10.1371/journal.pone.0109673.g004
Article Snippet: Plasmids For
Techniques: Knockdown, Cell Culture, Transduction, Expressing, shRNA, Control, Infection, Luciferase, Activity Assay, Virus
Journal: Virology
Article Title: Polymorphism in HIV-1 dependency factor PDE8A affects mRNA level and HIV-1 replication in primary macrophages.
doi: 10.1016/j.virol.2011.08.013
Figure Lengend Snippet: Fig. 2. Schematic overview of the five different PDE8A transcript variants, including 3′ UTR and a 2 kb region upstream of the ATG start codon containing the promoter and 5′ UTR. Exons are depicted as gray boxes, UTR (thick border) and promoter (thin border) as white boxes. SNPs in moderate to high LD (r2N0.6) with rs2304418 or rs12909130 that affect possible human transcription factor binding sites (#) or microsatellites (*) are shown, as well as the SNP identified in the promoter region of PDE8A. SNPs rs12909130 and rs12900078 were used for genotyping since they are perfect proxies for SNP rs2304418 and the promoter SNP rs11689332 respectively. All other SNPs in LD (r2N0.6) with rs12909130 or rs2304418 can be found in Table S3. LD, linkage disequilibrium.
Article Snippet: For PDE8A overexpression and knock-down the pCMV6-entry expressing a
Techniques: Binding Assay
Journal: Virology
Article Title: Polymorphism in HIV-1 dependency factor PDE8A affects mRNA level and HIV-1 replication in primary macrophages.
doi: 10.1016/j.virol.2011.08.013
Figure Lengend Snippet: Fig. 3. Top: schematic alignment of the 5 different PDE8A transcript variants. Primers (arrows) were designed to allow for the unique detection of each splice variant. Vertical lines represent start or stop codon. Bottom: PCR products confirming the presence of multiple different PDE8A transcripts in monocyte-derived macrophages. The similarity in PCR re- sults between MAJ, HZ and MIN donors suggests that SNP rs2304418 in PDE8A does not affect splicing of the PDE8A pre-mRNA. For transcript variant 5, additional nonspecific ampli- cons were seen for some donors. MAJ, homozygous for the major allele; HZ, heterozygous; MIN, homozygous for the minor allele; 100 bp, 100 base pair DNA marker.
Article Snippet: For PDE8A overexpression and knock-down the pCMV6-entry expressing a
Techniques: Variant Assay, Derivative Assay, Marker
Journal: Virology
Article Title: Polymorphism in HIV-1 dependency factor PDE8A affects mRNA level and HIV-1 replication in primary macrophages.
doi: 10.1016/j.virol.2011.08.013
Figure Lengend Snippet: Fig. 4. Western blot demonstrating PDE8A expression in monocyte-derived macro- phages derived from 2 healthy individuals. The bands correspond with PDE8A isoforms 1 (93 kDa), 2 (88 kDa), 3 (51 kDa), and isoforms 4 and 5 (both 66 kDa).
Article Snippet: For PDE8A overexpression and knock-down the pCMV6-entry expressing a
Techniques: Western Blot, Expressing, Derivative Assay
Journal: Virology
Article Title: Polymorphism in HIV-1 dependency factor PDE8A affects mRNA level and HIV-1 replication in primary macrophages.
doi: 10.1016/j.virol.2011.08.013
Figure Lengend Snippet: Fig. 5. SNP in PDE8A associated with messenger levels in monocyte-derived macrophages (MDM). (A) Quantitative PCR on MDM cDNA from 69 individuals showed a significant association between SNP rs12909130 (as a perfect proxy for rs2304418) genotype and PDE8A transcript 1 mRNA levels. GAPDH was used as reference gene; similar results were obtained when ACTB was used. Results are representative for transcript variants 1–4 (no data for transcript variant 5, since additional nonspecific amplicons were seen for some donors, Fig. 3) and multiple independent experiments. Filled circles represent samples used for resequencing. (B) When tested for association between transcript levels and SNP rs12900078 genotype (near perfect proxy for promoter SNP rs116893322), we again found a significant association. (C) PDE8A-promoter driven expression of luciferase did not differ between the variant containing the major (MAJ) or minor (MIN) allele of SNPs rs116893322. Bars represent the average measured value for one experiment and the standard deviation. Results are representative for multiple experiments, and different concentrations of PDE8A-promoter DNA used for the transfections (25, 50, 100 and 200 ng/well). (D) Trend towards association between SNP rs116893322 in the PDE8A promoter and HIV-1 replication as measured by normalized Gag p24 levels, tested for all donors (n=393). MAJ, homozygous for the major allele; HZ, heterozygous; MIN, homozygous for the minor allele.
Article Snippet: For PDE8A overexpression and knock-down the pCMV6-entry expressing a
Techniques: Derivative Assay, Real-time Polymerase Chain Reaction, Variant Assay, Expressing, Luciferase, Standard Deviation, Transfection
Journal: Virology
Article Title: Polymorphism in HIV-1 dependency factor PDE8A affects mRNA level and HIV-1 replication in primary macrophages.
doi: 10.1016/j.virol.2011.08.013
Figure Lengend Snippet: Fig. 6. Correlation between PDE8A mRNA levels and HIV-1 replication. SNP rs12909130 (perfect proxy for rs2304418) associated with (A) HIV-1 replication (measured as p24 ng/ ml, corrected for the number of monocyte-derived macrophages per well) and (B) PDE8A mRNA levels. (C) PDE8A1 mRNA levels are correlated with HIV-1 replication. MAJ, homo- zygous for the major allele; HZ, heterozygous; MIN, homozygous for the minor allele.
Article Snippet: For PDE8A overexpression and knock-down the pCMV6-entry expressing a
Techniques: Derivative Assay
Journal: Virology
Article Title: Polymorphism in HIV-1 dependency factor PDE8A affects mRNA level and HIV-1 replication in primary macrophages.
doi: 10.1016/j.virol.2011.08.013
Figure Lengend Snippet: Fig. 7. PDE8A supports HIV-1 replication in HEK293T cells. (A) HEK293T cells were transfected with pCMV6-PDE8A and after 24 h infected with VSV-G-pseudotyped luciferase re- porter virus. Luciferase activity was measured 2 days after infection. (B) HEK293T cells were co-transfected with pCMV6-PDE8A (1 μg) and constructs expressing shRNA's targeting PDE8A (1 μg). Twenty-four hours after transfection, the cells were infected with VSV-G-pseudotyped luciferase reporter virus and luciferase activity was measured at day 2 after infection. Combined results of 3 independent overexpression and knock-down experiments are shown. Western analysis demonstrating (C) dose-dependent overexpression of PDE8A and (D) knock-down of PDE8A by three different shRNA's in HEK293T cells. Results are representative for 2 independent experiments performed.
Article Snippet: For PDE8A overexpression and knock-down the pCMV6-entry expressing a
Techniques: Transfection, Infection, Luciferase, Virus, Activity Assay, Construct, Expressing, shRNA, Over Expression, Knockdown, Western Blot
Journal: Human Reproduction (Oxford, England)
Article Title: Gene dosage as a relevant mechanism contributing to the determination of ovarian function in Turner syndrome
doi: 10.1093/humrep/det436
Figure Lengend Snippet: Detailed list of the identified CNVs affecting genes potentially related to female fertility.
Article Snippet: The target TaqMan Copy Number mixes were chosen to detect: exon 8 (Hs01858886_cn) of the GYG2 gene (MIM *300198, at Xp22.3); exon 1 (Hs01299108_cn) and exon 2 (HS00957878_cn) of the BMP15 gene (MIM *300247, at Xp11.22); exon 10 (Hs05613398_cn) of the SMARCA1 gene (MIM *300012, at Xq26.1); exon 2 (Hs02373345_cn) and exon 7 (Hs01648393_cn) of the PAPPA gene (MIM *176385, at 9q33.1); intron 2 (
Techniques:
Journal: Human Reproduction (Oxford, England)
Article Title: Gene dosage as a relevant mechanism contributing to the determination of ovarian function in Turner syndrome
doi: 10.1093/humrep/det436
Figure Lengend Snippet: Detection of copy number variations. High-resolution aCGH analysis 244 K Agilent identified in patient PA5 a deletion of at least 216 kb at 9q33.1 (chr9:118971743-119187538, hg19), which interrupts the PAPPA gene coding region ( A ), in patient PA4 a duplication of at least 75 kb at 15q25.3 (chr15:85591615-85666309, hg19), which includes part of the PDE8A gene coding region ( B ), and in patient SM1 a duplication of at least 554 kb at Xp11.22 (chrX:50400649-50955142, hg19,), which contains the entire BMP15 gene ( C ). In addition, a mosaic deletion of at least 2 Mb at Xp22.33-p22.32 (chrX:2700316-4739185, hg19), which includes the entire PRKX gene, was detected in patient PA4 ( D ). The most important genes involved in the identified microrearrangements are highlighted in light blue.
Article Snippet: The target TaqMan Copy Number mixes were chosen to detect: exon 8 (Hs01858886_cn) of the GYG2 gene (MIM *300198, at Xp22.3); exon 1 (Hs01299108_cn) and exon 2 (HS00957878_cn) of the BMP15 gene (MIM *300247, at Xp11.22); exon 10 (Hs05613398_cn) of the SMARCA1 gene (MIM *300012, at Xq26.1); exon 2 (Hs02373345_cn) and exon 7 (Hs01648393_cn) of the PAPPA gene (MIM *176385, at 9q33.1); intron 2 (
Techniques:
Journal: Human Reproduction (Oxford, England)
Article Title: Gene dosage as a relevant mechanism contributing to the determination of ovarian function in Turner syndrome
doi: 10.1093/humrep/det436
Figure Lengend Snippet: Validation and structural characterization of the identified CNVs. ( A ) iFISH analysis performed on 100 nuclei from patient SM1 characterized the rearrangement involving BMP15 earlier identified by array-CGH analysis as a tandem duplication (thin arrow). In the 9% of the cells an additional smaller signal was identified (big arrow) which represents the low-level mosaic euploid cell line carrying a ring(X) chromosome as seen in the patient's metaphases ( B) . The BAC probe CTD-2004N6, specific for BMP15 , is shown in red and the CEP6 probe (locus D6Z1) is in green. ( C and D ) Multi-colour FISH analysis on metaphases from patient PA4 identified both the 45,X (C) and the 46,XX (D) cell lineages, and confirmed the presence of a heterozygous Xp terminal deletion in the euploid cell lineage (D), as demonstrated by the loss of the expected subtelomeric Xp signal (arrowhead) compared with the conserved X chromosome (arrow). The TelVysion 1p probe is shown in green, the TelVysion 1q is in red, the TelVysion Xp/Yp is in yellow (red + green merged) and CEPX (locus DXZ1) is in blue. ( E ) Real-time quantitative PCR on gDNAs from patients PA4 and PA5. PA4's copy number (CN) profile for both the PRKX and GYG2 genes, located at Xp22.32, showed only one copy of both genes (predicted CN = 1n), and confirmed the heterozygous duplication of part of the PDE8A gene, located at 15q25.3, by comparing the regions within (dark orange bar, 3n) and outside the duplication (light orange bar, 2n). The CN profile of patient PN5 identified the heterozygous deletion interrupting the PAPPA gene, located at 9q33.1, by comparing the region not affected (light purple bar, 2n) with the deleted one (dark purple bar, 1n). All samples were also compared with 46,XX control (calibrator) gDNA. *The CN profile of the interested regions has been previously tested by array-CGH analysis. Calculated mean CNs are shown on the left-axis, while predicted CNs are displayed on the top of each bar. SD, standard deviation, is represented by the error bars (CN means of the calibrator have been calculated as 2n by the analysis software and therefore no SD values are shown).
Article Snippet: The target TaqMan Copy Number mixes were chosen to detect: exon 8 (Hs01858886_cn) of the GYG2 gene (MIM *300198, at Xp22.3); exon 1 (Hs01299108_cn) and exon 2 (HS00957878_cn) of the BMP15 gene (MIM *300247, at Xp11.22); exon 10 (Hs05613398_cn) of the SMARCA1 gene (MIM *300012, at Xq26.1); exon 2 (Hs02373345_cn) and exon 7 (Hs01648393_cn) of the PAPPA gene (MIM *176385, at 9q33.1); intron 2 (
Techniques: Biomarker Discovery, Real-time Polymerase Chain Reaction, Control, Standard Deviation, Software
Journal: BMC Cancer
Article Title: Targeting B-Raf inhibitor resistant melanoma with novel cell penetrating peptide disrupters of PDE8A – C-Raf
doi: 10.1186/s12885-019-5489-4
Figure Lengend Snippet: Effects of PPL008 conjugates on pERK levels and rate of cell proliferation. Normalised phospho-ERK (mean ± SEM) following treatment with DMSO (lane 1), PLX4032 B-Raf inhibitor (lane 2), PPL008 conjugates (lanes 11–14) or PLX co-treatments with PDE8A – C-Raf peptide disrupters (original stearylated ‘disrupter’ lane 3, or scrambled control, lane 4) or PPL-008 conjugates (lanes 7–10) in: a MM415 (NRAS Q61L) and ( b ) A375 (BRAF V600E) human malignant melanoma cell lines. Respective pERK and GAPDH immunoblot examples shown below ( N ≥ 3, * P < 0.05, ** P < 0.01 ). c Real-time cell analyses (xCELLigence platform) of MM415 cell proliferation following treatments described above. Treatments occurred at 21 h and the slope of normalised cell index (mean ± STDEV) was measured between 21 and 39 h, with (ii) representing DMSO vs. peptide disrupter treatments only (10 μM) and (iii) representing PLX (1 μM) vs. co-treatments of peptide disrupters and PLX4032 ( n = 3, *** P < 0.001) . D, stearylated disrupter; S, stearylated scrambled; N, PPL-008 N; C, PPL-008C; NSS, PPL-008NSS; CSS, PPL-008CSS
Article Snippet: The original
Techniques: Control, Western Blot
Journal: BMC Cancer
Article Title: Targeting B-Raf inhibitor resistant melanoma with novel cell penetrating peptide disrupters of PDE8A – C-Raf
doi: 10.1186/s12885-019-5489-4
Figure Lengend Snippet: Dual inhibition of B-Raf and C-Raf inhibits melanoma tumour progression. a B-Raf inhibition leads to the Ras negative feedback mechanism switching to C-Raf driven tumourigenesis via potentiation of the Raf/MEK/ERK signalling axis. b PPL-008 (PDE8A – C-Raf disrupter peptide) binds to C-Raf, preventing PDE8A localisation within the C-Raf cAMP microdomain and exposing serine 259 – C-Raf to inhibitory phosphorylation by PKA. Co-treatment with B-Raf inhibitor and PPL-008 blocks onco-Ras driven tumour progression via inhibition of the Raf/MEK/ERK axis
Article Snippet: The original
Techniques: Inhibition, Phospho-proteomics