ip3r2 Search Results


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Alomone Labs acc
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Pocono Rabbit Farm ip 3 r2
( A ) Confocal images of hNPCs (passage 6) stained for DAPI and neural stem cell proteins: Pax6 and Ki67 (proliferation marker). Scale bars, 50 μm. ( B ) WB for <t>IP</t> <t>3</t> R1 of hNPCs expressing non-silencing (NS) or IP 3 R1-shRNA. ( C ) Summary results (mean ±s.d., n=3) show IP 3 R1 expression relative to actin. ** p < 0.01, Student’s t -test with unequal variances. ( D ) Changes in [Ca 2+ ] c evoked by thapsigargin (Tg, 10 µM) in Ca 2+ -free HBSS and then restoration of extracellular Ca 2+ (2 mM) in hNPCs expressing NS or IP 3 R1-shRNA. Mean ± s.e.m. from hree independent experiments, each with four replicates that together included 100–254 cells. Inset shows the target of Tg. ( E–G ) Summary results (individual cells, median (bar), 25th and 75th percentiles (box) and mean (circle)) show Ca 2+ signals evoked by Tg or Ca 2+ restoration ( E ), rate of Ca 2+ entry ( F ) and resting [Ca 2+ ] c ( G ). *** p < 0.001, Mann-Whitney U-test. ( H ) Changes in [Ca 2+ ] c evoked by Tg (10 µM) in Ca 2+ -free HBSS and after restoring extracellular Ca 2+ (2 mM) in neurons (differentiated hNPCs) expressing NS or IP 3 R1-shRNA. Mean ± s.e.m. from three experiments with ~200 cells. ( I,J ) Summary results (presented as in E-G) show Ca 2+ signals evoked by Tg or Ca 2+ restoration ( I ) and rate of Ca 2+ entry ( J ). *** p < 0.001. Mann-Whitney U-test. See also . Source data in . Figure 1—source data 1. Loss of IP 3 R1 attenuates SOCE in human neural stem cells.
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Alomone Labs ip3r2 antibody
( A ) Confocal images of hNPCs (passage 6) stained for DAPI and neural stem cell proteins: Pax6 and Ki67 (proliferation marker). Scale bars, 50 μm. ( B ) WB for <t>IP</t> <t>3</t> R1 of hNPCs expressing non-silencing (NS) or IP 3 R1-shRNA. ( C ) Summary results (mean ±s.d., n=3) show IP 3 R1 expression relative to actin. ** p < 0.01, Student’s t -test with unequal variances. ( D ) Changes in [Ca 2+ ] c evoked by thapsigargin (Tg, 10 µM) in Ca 2+ -free HBSS and then restoration of extracellular Ca 2+ (2 mM) in hNPCs expressing NS or IP 3 R1-shRNA. Mean ± s.e.m. from hree independent experiments, each with four replicates that together included 100–254 cells. Inset shows the target of Tg. ( E–G ) Summary results (individual cells, median (bar), 25th and 75th percentiles (box) and mean (circle)) show Ca 2+ signals evoked by Tg or Ca 2+ restoration ( E ), rate of Ca 2+ entry ( F ) and resting [Ca 2+ ] c ( G ). *** p < 0.001, Mann-Whitney U-test. ( H ) Changes in [Ca 2+ ] c evoked by Tg (10 µM) in Ca 2+ -free HBSS and after restoring extracellular Ca 2+ (2 mM) in neurons (differentiated hNPCs) expressing NS or IP 3 R1-shRNA. Mean ± s.e.m. from three experiments with ~200 cells. ( I,J ) Summary results (presented as in E-G) show Ca 2+ signals evoked by Tg or Ca 2+ restoration ( I ) and rate of Ca 2+ entry ( J ). *** p < 0.001. Mann-Whitney U-test. See also . Source data in . Figure 1—source data 1. Loss of IP 3 R1 attenuates SOCE in human neural stem cells.
Ip3r2 Antibody, supplied by Alomone Labs, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Qiagen ip 3 r2 sirna
Loss of IP 3 Rs Causes Misalignment of Mitotic Spindles (A) Typical projections of confocal z stacks from cells stained for chromosomes (blue), α-tubulin (green), and γ-tubulin (red) show spindle angles (α) during metaphase for a WT and HEK-IP 3 R-KO cell. Dashed lines show substratum. Scale bars: 10 μm. (B) Spindle angles for WT and HEK-IP 3 R-KO cells (individual values, means ± SD from five experiments). ∗∗ p < 0.01, Student’s t test. (C) Frequency distribution of spindle angles (n = 68–71 cells, from five experiments). ∗∗∗ p < 0.001, χ 2 test for trend. (D) Typical western blots (WBs) for IP 3 R subtypes in HEK cells treated with siRNAs to all three IP 3 R subtypes or non-silencing (NS) <t>siRNA.</t> (E) Summary results show IP 3 R expression determined by quantification of WB for cells treated with IP 3 R siRNA relative to NS siRNA (%, means ± SD, n = 4). (F) Spindle angles for matched comparisons of WT and HEK-IP 3 R-KO cells and cells treated with NS or IP 3 R siRNA (individual values, means ± SD from five experiments). ∗ p < 0.05, ∗∗ p < 0.01, ∗∗∗ p < 0.001, ANOVA with Bonferroni test. (G) Frequency distributions of spindle angles for cells (WT or IP 3 R-KO) treated with NS or IP 3 R siRNA (n = 64–75 cells, from five experiments). ∗∗∗ p < 0.001, ∗ p < 0.05, relative to WT with NS siRNA, χ 2 test for trend. (H) Cross-sections through 3D reconstructions of confocal z stack images of mitotic HEK cells expressing EGFP-IP 3 R3 or untagged IP 3 R3, immunostained for IP 3 R3 (red) and showing chromosomes (DAPI, blue) and γ-tubulin (white). Scale bars: 10 μm. (I) Spindle angles for WT and HEK-IP 3 R-KO cells transiently expressing IP 3 R3 or EGFP-IP 3 R3. Results (individual values, means ± SD, from five experiments). ∗ p < 0.05, ∗∗ p < 0.01, ANOVA with Bonferroni test. (J) Frequency distributions of spindle angles (n = 53–65 cells, from five experiments). ∗∗∗ p < 0.001, relative to WT; +++ p < 0.001, relative to IP 3 R-KO, χ 2 test for trend. See also and and .
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Jackson Laboratory ip 3 r2 knockout mice
Relative IP 3 <t>R2</t> gene expression is increased in models of neurodegeneration and inflammation. ( A ) Relative gene expression of IP 3 R2 assessed by qPCR on ventral spinal cords of non-transgenic (ntg; n = <t>6),</t> <t>SOD1</t> WT (wt; n = 6), pre-symptomatic SOD1 G93A (pre-s; n = 6), symptomatic SOD1 G93A (s; n = 5) and end stage SOD1 G93A (es; n = 5) mice (ANOVA, Bonferroni post-hoc). ( B ) Relative IP 3 R2 gene expression analysed in the lumbar spinal cord of severely affected EAE-mice ( n = 3) and control mice ( n = 6) by qPCR (unpaired t- test). ( C ) Relative IP 3 R2 gene expression analysed in the penumbra zone of stroke in mice ( n = 4) and a similar region in the contralateral side of the brain by qPCR (paired t -test). ( D ) Relative IP 3 R2 gene expression in ventral spinal cord astrocytes in vitro by 24 h LPS application ( n = 8) or vehicle ( n = 8; unpaired t -test). ( E ) Relative IP 3 R2 gene expression in murine macrophages ( n = 4; Wilcoxon signed rank test compared to 1.0, two-tailed). The dotted line reflects the normalising vehicle condition set at 1. Mean ± standard deviation. * P < 0.05, ** P < 0.01, *** P < 0.001, **** P < 0.0001.
Ip 3 R2 Knockout Mice, supplied by Jackson Laboratory, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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SUNY Upstate Medical University antibody for ip3r2
Relative IP 3 <t>R2</t> gene expression is increased in models of neurodegeneration and inflammation. ( A ) Relative gene expression of IP 3 R2 assessed by qPCR on ventral spinal cords of non-transgenic (ntg; n = <t>6),</t> <t>SOD1</t> WT (wt; n = 6), pre-symptomatic SOD1 G93A (pre-s; n = 6), symptomatic SOD1 G93A (s; n = 5) and end stage SOD1 G93A (es; n = 5) mice (ANOVA, Bonferroni post-hoc). ( B ) Relative IP 3 R2 gene expression analysed in the lumbar spinal cord of severely affected EAE-mice ( n = 3) and control mice ( n = 6) by qPCR (unpaired t- test). ( C ) Relative IP 3 R2 gene expression analysed in the penumbra zone of stroke in mice ( n = 4) and a similar region in the contralateral side of the brain by qPCR (paired t -test). ( D ) Relative IP 3 R2 gene expression in ventral spinal cord astrocytes in vitro by 24 h LPS application ( n = 8) or vehicle ( n = 8; unpaired t -test). ( E ) Relative IP 3 R2 gene expression in murine macrophages ( n = 4; Wilcoxon signed rank test compared to 1.0, two-tailed). The dotted line reflects the normalising vehicle condition set at 1. Mean ± standard deviation. * P < 0.05, ** P < 0.01, *** P < 0.001, **** P < 0.0001.
Antibody For Ip3r2, supplied by SUNY Upstate Medical University, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Abiocode Inc rabbit polyclonal anti- ip3r2
Relative IP 3 <t>R2</t> gene expression is increased in models of neurodegeneration and inflammation. ( A ) Relative gene expression of IP 3 R2 assessed by qPCR on ventral spinal cords of non-transgenic (ntg; n = <t>6),</t> <t>SOD1</t> WT (wt; n = 6), pre-symptomatic SOD1 G93A (pre-s; n = 6), symptomatic SOD1 G93A (s; n = 5) and end stage SOD1 G93A (es; n = 5) mice (ANOVA, Bonferroni post-hoc). ( B ) Relative IP 3 R2 gene expression analysed in the lumbar spinal cord of severely affected EAE-mice ( n = 3) and control mice ( n = 6) by qPCR (unpaired t- test). ( C ) Relative IP 3 R2 gene expression analysed in the penumbra zone of stroke in mice ( n = 4) and a similar region in the contralateral side of the brain by qPCR (paired t -test). ( D ) Relative IP 3 R2 gene expression in ventral spinal cord astrocytes in vitro by 24 h LPS application ( n = 8) or vehicle ( n = 8; unpaired t -test). ( E ) Relative IP 3 R2 gene expression in murine macrophages ( n = 4; Wilcoxon signed rank test compared to 1.0, two-tailed). The dotted line reflects the normalising vehicle condition set at 1. Mean ± standard deviation. * P < 0.05, ** P < 0.01, *** P < 0.001, **** P < 0.0001.
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Microsynth ag ip 3 r2 sirna gagaaggcucgaugcugagacuugatt
Relative IP 3 <t>R2</t> gene expression is increased in models of neurodegeneration and inflammation. ( A ) Relative gene expression of IP 3 R2 assessed by qPCR on ventral spinal cords of non-transgenic (ntg; n = <t>6),</t> <t>SOD1</t> WT (wt; n = 6), pre-symptomatic SOD1 G93A (pre-s; n = 6), symptomatic SOD1 G93A (s; n = 5) and end stage SOD1 G93A (es; n = 5) mice (ANOVA, Bonferroni post-hoc). ( B ) Relative IP 3 R2 gene expression analysed in the lumbar spinal cord of severely affected EAE-mice ( n = 3) and control mice ( n = 6) by qPCR (unpaired t- test). ( C ) Relative IP 3 R2 gene expression analysed in the penumbra zone of stroke in mice ( n = 4) and a similar region in the contralateral side of the brain by qPCR (paired t -test). ( D ) Relative IP 3 R2 gene expression in ventral spinal cord astrocytes in vitro by 24 h LPS application ( n = 8) or vehicle ( n = 8; unpaired t -test). ( E ) Relative IP 3 R2 gene expression in murine macrophages ( n = 4; Wilcoxon signed rank test compared to 1.0, two-tailed). The dotted line reflects the normalising vehicle condition set at 1. Mean ± standard deviation. * P < 0.05, ** P < 0.01, *** P < 0.001, **** P < 0.0001.
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Amersham Life Sciences Inc anti-ip3r2 antibody directed against the c-terminus
Relative IP 3 <t>R2</t> gene expression is increased in models of neurodegeneration and inflammation. ( A ) Relative gene expression of IP 3 R2 assessed by qPCR on ventral spinal cords of non-transgenic (ntg; n = <t>6),</t> <t>SOD1</t> WT (wt; n = 6), pre-symptomatic SOD1 G93A (pre-s; n = 6), symptomatic SOD1 G93A (s; n = 5) and end stage SOD1 G93A (es; n = 5) mice (ANOVA, Bonferroni post-hoc). ( B ) Relative IP 3 R2 gene expression analysed in the lumbar spinal cord of severely affected EAE-mice ( n = 3) and control mice ( n = 6) by qPCR (unpaired t- test). ( C ) Relative IP 3 R2 gene expression analysed in the penumbra zone of stroke in mice ( n = 4) and a similar region in the contralateral side of the brain by qPCR (paired t -test). ( D ) Relative IP 3 R2 gene expression in ventral spinal cord astrocytes in vitro by 24 h LPS application ( n = 8) or vehicle ( n = 8; unpaired t -test). ( E ) Relative IP 3 R2 gene expression in murine macrophages ( n = 4; Wilcoxon signed rank test compared to 1.0, two-tailed). The dotted line reflects the normalising vehicle condition set at 1. Mean ± standard deviation. * P < 0.05, ** P < 0.01, *** P < 0.001, **** P < 0.0001.
Anti Ip3r2 Antibody Directed Against The C Terminus, supplied by Amersham Life Sciences Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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SunBio Inc gfap-ip3r2 shrnas
Relative IP 3 <t>R2</t> gene expression is increased in models of neurodegeneration and inflammation. ( A ) Relative gene expression of IP 3 R2 assessed by qPCR on ventral spinal cords of non-transgenic (ntg; n = <t>6),</t> <t>SOD1</t> WT (wt; n = 6), pre-symptomatic SOD1 G93A (pre-s; n = 6), symptomatic SOD1 G93A (s; n = 5) and end stage SOD1 G93A (es; n = 5) mice (ANOVA, Bonferroni post-hoc). ( B ) Relative IP 3 R2 gene expression analysed in the lumbar spinal cord of severely affected EAE-mice ( n = 3) and control mice ( n = 6) by qPCR (unpaired t- test). ( C ) Relative IP 3 R2 gene expression analysed in the penumbra zone of stroke in mice ( n = 4) and a similar region in the contralateral side of the brain by qPCR (paired t -test). ( D ) Relative IP 3 R2 gene expression in ventral spinal cord astrocytes in vitro by 24 h LPS application ( n = 8) or vehicle ( n = 8; unpaired t -test). ( E ) Relative IP 3 R2 gene expression in murine macrophages ( n = 4; Wilcoxon signed rank test compared to 1.0, two-tailed). The dotted line reflects the normalising vehicle condition set at 1. Mean ± standard deviation. * P < 0.05, ** P < 0.01, *** P < 0.001, **** P < 0.0001.
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GenScript corporation anti-ip3r-2 antibody (epitope: npdyrdaqnegknv)
Relative IP 3 <t>R2</t> gene expression is increased in models of neurodegeneration and inflammation. ( A ) Relative gene expression of IP 3 R2 assessed by qPCR on ventral spinal cords of non-transgenic (ntg; n = <t>6),</t> <t>SOD1</t> WT (wt; n = 6), pre-symptomatic SOD1 G93A (pre-s; n = 6), symptomatic SOD1 G93A (s; n = 5) and end stage SOD1 G93A (es; n = 5) mice (ANOVA, Bonferroni post-hoc). ( B ) Relative IP 3 R2 gene expression analysed in the lumbar spinal cord of severely affected EAE-mice ( n = 3) and control mice ( n = 6) by qPCR (unpaired t- test). ( C ) Relative IP 3 R2 gene expression analysed in the penumbra zone of stroke in mice ( n = 4) and a similar region in the contralateral side of the brain by qPCR (paired t -test). ( D ) Relative IP 3 R2 gene expression in ventral spinal cord astrocytes in vitro by 24 h LPS application ( n = 8) or vehicle ( n = 8; unpaired t -test). ( E ) Relative IP 3 R2 gene expression in murine macrophages ( n = 4; Wilcoxon signed rank test compared to 1.0, two-tailed). The dotted line reflects the normalising vehicle condition set at 1. Mean ± standard deviation. * P < 0.05, ** P < 0.01, *** P < 0.001, **** P < 0.0001.
Anti Ip3r 2 Antibody (Epitope: Npdyrdaqnegknv), supplied by GenScript corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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BioResource International Inc ip 3 r2 ko mice
Relative IP 3 <t>R2</t> gene expression is increased in models of neurodegeneration and inflammation. ( A ) Relative gene expression of IP 3 R2 assessed by qPCR on ventral spinal cords of non-transgenic (ntg; n = <t>6),</t> <t>SOD1</t> WT (wt; n = 6), pre-symptomatic SOD1 G93A (pre-s; n = 6), symptomatic SOD1 G93A (s; n = 5) and end stage SOD1 G93A (es; n = 5) mice (ANOVA, Bonferroni post-hoc). ( B ) Relative IP 3 R2 gene expression analysed in the lumbar spinal cord of severely affected EAE-mice ( n = 3) and control mice ( n = 6) by qPCR (unpaired t- test). ( C ) Relative IP 3 R2 gene expression analysed in the penumbra zone of stroke in mice ( n = 4) and a similar region in the contralateral side of the brain by qPCR (paired t -test). ( D ) Relative IP 3 R2 gene expression in ventral spinal cord astrocytes in vitro by 24 h LPS application ( n = 8) or vehicle ( n = 8; unpaired t -test). ( E ) Relative IP 3 R2 gene expression in murine macrophages ( n = 4; Wilcoxon signed rank test compared to 1.0, two-tailed). The dotted line reflects the normalising vehicle condition set at 1. Mean ± standard deviation. * P < 0.05, ** P < 0.01, *** P < 0.001, **** P < 0.0001.
Ip 3 R2 Ko Mice, supplied by BioResource International Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


( A ) Confocal images of hNPCs (passage 6) stained for DAPI and neural stem cell proteins: Pax6 and Ki67 (proliferation marker). Scale bars, 50 μm. ( B ) WB for IP 3 R1 of hNPCs expressing non-silencing (NS) or IP 3 R1-shRNA. ( C ) Summary results (mean ±s.d., n=3) show IP 3 R1 expression relative to actin. ** p < 0.01, Student’s t -test with unequal variances. ( D ) Changes in [Ca 2+ ] c evoked by thapsigargin (Tg, 10 µM) in Ca 2+ -free HBSS and then restoration of extracellular Ca 2+ (2 mM) in hNPCs expressing NS or IP 3 R1-shRNA. Mean ± s.e.m. from hree independent experiments, each with four replicates that together included 100–254 cells. Inset shows the target of Tg. ( E–G ) Summary results (individual cells, median (bar), 25th and 75th percentiles (box) and mean (circle)) show Ca 2+ signals evoked by Tg or Ca 2+ restoration ( E ), rate of Ca 2+ entry ( F ) and resting [Ca 2+ ] c ( G ). *** p < 0.001, Mann-Whitney U-test. ( H ) Changes in [Ca 2+ ] c evoked by Tg (10 µM) in Ca 2+ -free HBSS and after restoring extracellular Ca 2+ (2 mM) in neurons (differentiated hNPCs) expressing NS or IP 3 R1-shRNA. Mean ± s.e.m. from three experiments with ~200 cells. ( I,J ) Summary results (presented as in E-G) show Ca 2+ signals evoked by Tg or Ca 2+ restoration ( I ) and rate of Ca 2+ entry ( J ). *** p < 0.001. Mann-Whitney U-test. See also . Source data in . Figure 1—source data 1. Loss of IP 3 R1 attenuates SOCE in human neural stem cells.

Journal: eLife

Article Title: Regulation of store-operated Ca 2+ entry by IP 3 receptors independent of their ability to release Ca 2+

doi: 10.7554/eLife.80447

Figure Lengend Snippet: ( A ) Confocal images of hNPCs (passage 6) stained for DAPI and neural stem cell proteins: Pax6 and Ki67 (proliferation marker). Scale bars, 50 μm. ( B ) WB for IP 3 R1 of hNPCs expressing non-silencing (NS) or IP 3 R1-shRNA. ( C ) Summary results (mean ±s.d., n=3) show IP 3 R1 expression relative to actin. ** p < 0.01, Student’s t -test with unequal variances. ( D ) Changes in [Ca 2+ ] c evoked by thapsigargin (Tg, 10 µM) in Ca 2+ -free HBSS and then restoration of extracellular Ca 2+ (2 mM) in hNPCs expressing NS or IP 3 R1-shRNA. Mean ± s.e.m. from hree independent experiments, each with four replicates that together included 100–254 cells. Inset shows the target of Tg. ( E–G ) Summary results (individual cells, median (bar), 25th and 75th percentiles (box) and mean (circle)) show Ca 2+ signals evoked by Tg or Ca 2+ restoration ( E ), rate of Ca 2+ entry ( F ) and resting [Ca 2+ ] c ( G ). *** p < 0.001, Mann-Whitney U-test. ( H ) Changes in [Ca 2+ ] c evoked by Tg (10 µM) in Ca 2+ -free HBSS and after restoring extracellular Ca 2+ (2 mM) in neurons (differentiated hNPCs) expressing NS or IP 3 R1-shRNA. Mean ± s.e.m. from three experiments with ~200 cells. ( I,J ) Summary results (presented as in E-G) show Ca 2+ signals evoked by Tg or Ca 2+ restoration ( I ) and rate of Ca 2+ entry ( J ). *** p < 0.001. Mann-Whitney U-test. See also . Source data in . Figure 1—source data 1. Loss of IP 3 R1 attenuates SOCE in human neural stem cells.

Article Snippet: The primary antibodies used were to: IP 3 R1 (1:1000, ThermoFisher, Cat# PA1-901, RRID: AB_2129984 ); β-actin (1:5000, BD Biosciences, Cat# 612656, RRID: AB_2289199 ); STIM1 (1:1000, Cell Signaling Technology, Cat# 5668 S, RRID: AB_10828699 ); Orai1 (1:500, ProSci, Cat# PM-5205, RRID: AB_10941192 ); IP 3 R2 (1:1000, custom made by Pocono Rabbit Farm and Laboratory; ); and IP 3 R3 (1:500, BD Biosciences, Cat# 610313, RRID: AB_397705 ).

Techniques: Staining, Marker, Expressing, shRNA, MANN-WHITNEY

( A ) WB for IP R1-3 of SH-SY5Y cells expressing non-silencing (NS) or IP R1-shRNA. ( B ) Summary results (mean ± s.d., n=4) show IP R expression relative to actin normalized to control NS cells. ** p < 0.01, Student’s t -test with unequal variances. ( C ) Ca 2+ signals evoked by carbachol (CCh, 3 µM) in SH-SY5Y cells expressing NS or IP R1-shRNA. Mean ± s.e.m. from three experiments with 70–90 cells. ( D ) Summary results show peak changes in [Ca 2+ ] c (Δ[Ca 2+ ] c ) evoked by CCh. *** p < 0.001, Mann-Whitney U-test. ( E ) Ca 2+ signals evoked by thapsigargin (Tg, 10 µM) in Ca 2+ -free HBSS and then after restoration of extracellular Ca 2+ (2 mM) in cells expressing NS or IP R1-shRNA. Mean ± s.e.m. from three experiments with ~50 cells. ( F, G ) Summary results (individual cells, mean ± s.e.m., n=3, ~50 cells) show peak changes in [Ca 2+ ] c evoked by Ca 2+ restoration (Δ[Ca 2+ ] c ) ( F ) and rate of Ca 2+ entry ( G ). *** p < 0.001, Mann-Whitney U-test. ( H ) Ca 2+ signals evoked by Tg and then Ca 2+ restoration in cells expressing NS-shRNA, or IP R1-shRNA alone or with IP R1 or IP R3. Traces show mean ± s.e.m. (50–115 cells from three experiments). ( I, J ) Summary results (mean ± s.e.m, 50–115 cells from three experiments) show peak increases in [Ca 2+ ] c (Δ[Ca 2+ ] c ) evoked by Ca 2+ restoration ( I ) and rates of Ca 2+ entry ( J ) evoked by restoring extracellular Ca 2+ . ( K ) Effects of thapsigargin (Tg, 10 µM) in Ca 2+ -free HBSS and then after Ca 2+ restoration (2 mM) in cells expressing IP R1-shRNA alone or with IP R1 or mCh-STIM1. Traces show mean ± s.e.m. (100–150 cells from three experiments). ( L, M ) Summary results (mean ± s.e.m.) show peak increase in [Ca 2+ ] c after Ca 2+ restoration (Δ[Ca 2+ ] c ) ( L ) and rate of Ca 2+ entry ( M ). Different letters indicate significant differences (panels I , J, L, M), p <0.001, one-way ANOVA with pair-wise Tukey’s test. See also – . Source data in . Figure 2—source data 1. Loss of IP 3 R1 attenuates SOCE in SH-SY5Y cells.

Journal: eLife

Article Title: Regulation of store-operated Ca 2+ entry by IP 3 receptors independent of their ability to release Ca 2+

doi: 10.7554/eLife.80447

Figure Lengend Snippet: ( A ) WB for IP R1-3 of SH-SY5Y cells expressing non-silencing (NS) or IP R1-shRNA. ( B ) Summary results (mean ± s.d., n=4) show IP R expression relative to actin normalized to control NS cells. ** p < 0.01, Student’s t -test with unequal variances. ( C ) Ca 2+ signals evoked by carbachol (CCh, 3 µM) in SH-SY5Y cells expressing NS or IP R1-shRNA. Mean ± s.e.m. from three experiments with 70–90 cells. ( D ) Summary results show peak changes in [Ca 2+ ] c (Δ[Ca 2+ ] c ) evoked by CCh. *** p < 0.001, Mann-Whitney U-test. ( E ) Ca 2+ signals evoked by thapsigargin (Tg, 10 µM) in Ca 2+ -free HBSS and then after restoration of extracellular Ca 2+ (2 mM) in cells expressing NS or IP R1-shRNA. Mean ± s.e.m. from three experiments with ~50 cells. ( F, G ) Summary results (individual cells, mean ± s.e.m., n=3, ~50 cells) show peak changes in [Ca 2+ ] c evoked by Ca 2+ restoration (Δ[Ca 2+ ] c ) ( F ) and rate of Ca 2+ entry ( G ). *** p < 0.001, Mann-Whitney U-test. ( H ) Ca 2+ signals evoked by Tg and then Ca 2+ restoration in cells expressing NS-shRNA, or IP R1-shRNA alone or with IP R1 or IP R3. Traces show mean ± s.e.m. (50–115 cells from three experiments). ( I, J ) Summary results (mean ± s.e.m, 50–115 cells from three experiments) show peak increases in [Ca 2+ ] c (Δ[Ca 2+ ] c ) evoked by Ca 2+ restoration ( I ) and rates of Ca 2+ entry ( J ) evoked by restoring extracellular Ca 2+ . ( K ) Effects of thapsigargin (Tg, 10 µM) in Ca 2+ -free HBSS and then after Ca 2+ restoration (2 mM) in cells expressing IP R1-shRNA alone or with IP R1 or mCh-STIM1. Traces show mean ± s.e.m. (100–150 cells from three experiments). ( L, M ) Summary results (mean ± s.e.m.) show peak increase in [Ca 2+ ] c after Ca 2+ restoration (Δ[Ca 2+ ] c ) ( L ) and rate of Ca 2+ entry ( M ). Different letters indicate significant differences (panels I , J, L, M), p <0.001, one-way ANOVA with pair-wise Tukey’s test. See also – . Source data in . Figure 2—source data 1. Loss of IP 3 R1 attenuates SOCE in SH-SY5Y cells.

Article Snippet: The primary antibodies used were to: IP 3 R1 (1:1000, ThermoFisher, Cat# PA1-901, RRID: AB_2129984 ); β-actin (1:5000, BD Biosciences, Cat# 612656, RRID: AB_2289199 ); STIM1 (1:1000, Cell Signaling Technology, Cat# 5668 S, RRID: AB_10828699 ); Orai1 (1:500, ProSci, Cat# PM-5205, RRID: AB_10941192 ); IP 3 R2 (1:1000, custom made by Pocono Rabbit Farm and Laboratory; ); and IP 3 R3 (1:500, BD Biosciences, Cat# 610313, RRID: AB_397705 ).

Techniques: Expressing, shRNA, MANN-WHITNEY

( A ) SOCE is activated when loss of Ca 2+ from the ER through IP 3 Rs activates STIM1 ( i ). Our results suggest an additional role for IP 3 Rs (ii). ( B ) SH-SY5Y cells expressing IP 3 R1-shRNA alone or with IP 3 R1 or IP 3 R1 DA were stimulated with thapsigargin (Tg, 1 µM) in Ca 2+ -free HBSS before restoring extracellular Ca 2+ (2 mM). Traces show mean ± s.e.m, for 100–150 cells from three experiments. ( C ) Cells expressing IP 3 R1-shRNA and IP 3 R1 DA were treated with NS-siRNA or Orai1-siRNA before measuring Tg-evoked Ca 2+ entry. Traces show mean ± s.e.m. for 85–100 cells from three experiments. ( D ) Summary results (mean ± s.e.m.) show peak increases in [Ca 2+ ] c (Δ[Ca 2+ ] c ) evoked by Ca 2+ restoration. ( E ) Tg-evoked Ca 2+ entry in cells expressing IP 3 R1-shRNA with IP 3 R1, IP 3 R1 RQ or IP 3 R1 RQ/KQ . Traces show mean ± s.e.m, for 90–150 cells from three experiments. ( F ) Summary results (mean ± s.e.m.) show peak increases in [Ca 2+ ] c (Δ[Ca 2+ ] c ) evoked by Ca 2+ restoration. Different letter codes (panels D , F ) indicate significantly different values, p<0.001, for multiple comparison one-way ANOVA and pair-wise Tukey’s test and for two genotype comparison Mann Whitney U-test. See also . Source data in . Figure 3—source data 1. Regulation of SOCE by IP 3 R requires IP 3 binding but not a functional pPore in SH-SY5Y cells.

Journal: eLife

Article Title: Regulation of store-operated Ca 2+ entry by IP 3 receptors independent of their ability to release Ca 2+

doi: 10.7554/eLife.80447

Figure Lengend Snippet: ( A ) SOCE is activated when loss of Ca 2+ from the ER through IP 3 Rs activates STIM1 ( i ). Our results suggest an additional role for IP 3 Rs (ii). ( B ) SH-SY5Y cells expressing IP 3 R1-shRNA alone or with IP 3 R1 or IP 3 R1 DA were stimulated with thapsigargin (Tg, 1 µM) in Ca 2+ -free HBSS before restoring extracellular Ca 2+ (2 mM). Traces show mean ± s.e.m, for 100–150 cells from three experiments. ( C ) Cells expressing IP 3 R1-shRNA and IP 3 R1 DA were treated with NS-siRNA or Orai1-siRNA before measuring Tg-evoked Ca 2+ entry. Traces show mean ± s.e.m. for 85–100 cells from three experiments. ( D ) Summary results (mean ± s.e.m.) show peak increases in [Ca 2+ ] c (Δ[Ca 2+ ] c ) evoked by Ca 2+ restoration. ( E ) Tg-evoked Ca 2+ entry in cells expressing IP 3 R1-shRNA with IP 3 R1, IP 3 R1 RQ or IP 3 R1 RQ/KQ . Traces show mean ± s.e.m, for 90–150 cells from three experiments. ( F ) Summary results (mean ± s.e.m.) show peak increases in [Ca 2+ ] c (Δ[Ca 2+ ] c ) evoked by Ca 2+ restoration. Different letter codes (panels D , F ) indicate significantly different values, p<0.001, for multiple comparison one-way ANOVA and pair-wise Tukey’s test and for two genotype comparison Mann Whitney U-test. See also . Source data in . Figure 3—source data 1. Regulation of SOCE by IP 3 R requires IP 3 binding but not a functional pPore in SH-SY5Y cells.

Article Snippet: The primary antibodies used were to: IP 3 R1 (1:1000, ThermoFisher, Cat# PA1-901, RRID: AB_2129984 ); β-actin (1:5000, BD Biosciences, Cat# 612656, RRID: AB_2289199 ); STIM1 (1:1000, Cell Signaling Technology, Cat# 5668 S, RRID: AB_10828699 ); Orai1 (1:500, ProSci, Cat# PM-5205, RRID: AB_10941192 ); IP 3 R2 (1:1000, custom made by Pocono Rabbit Farm and Laboratory; ); and IP 3 R3 (1:500, BD Biosciences, Cat# 610313, RRID: AB_397705 ).

Techniques: Expressing, shRNA, MANN-WHITNEY, Binding Assay, Functional Assay

( A, B ) SH-SY5Y cells expressing IP 3 R1-shRNA alone ( A ) or with IP 3 R1 DA ( B ) were treated with a low concentration of CPA (2 µM) in Ca 2+ -free HBSS to partially deplete the ER of Ca 2+ and sub-maximally activate SOCE (see ). Carbachol (CCh, 1 µM) was then added to stimulate IP 3 formation through muscarinic receptors, and extracellular Ca 2+ (2 mM) was then restored. Traces (mean ± s.e.m of 68–130 cells from three experiments) show responses with and without the CCh addition. ( C ) Summary results show the peak increases in [Ca 2+ ] c (Δ[Ca 2+ ] c ) after addition of CCh (CCh-induced Ca 2+ release) and then after restoring extracellular Ca 2+ (SOCE). ( D–F ) SH-SY5Y cells wild type (WT) ( D ) and expressing NS-shRNA ( E ) or IP 3 R1-shRNA ( F ) were treated with YM-254890 (YM, 1 µM, 5 min) in Ca 2+ -free HBSS to inhibit Gαq and then with thapsigargin (Tg, 1 µM) before restoring extracellular Ca 2+ (2 mM). Traces show mean ± s.e.m of ~120 cells from three experiments. ( G–I ) Similar analyses of HEK cells. Summary results (mean ± s.e.m, 50–100 cells from three experiments) are shown in ( I ). Different letter codes (panels C and I) indicate significantly different values within the store Ca 2+ release or SOCE groups, p<0.001, one-way ANOVA and pair-wise Tukey’s test. See also . Source data in . Figure 4—source data 1. Receptor-regulated IP 3 production stimulates SOCE in cells with empty Ca 2+ stores and expressing pore-dead IP 3 R.

Journal: eLife

Article Title: Regulation of store-operated Ca 2+ entry by IP 3 receptors independent of their ability to release Ca 2+

doi: 10.7554/eLife.80447

Figure Lengend Snippet: ( A, B ) SH-SY5Y cells expressing IP 3 R1-shRNA alone ( A ) or with IP 3 R1 DA ( B ) were treated with a low concentration of CPA (2 µM) in Ca 2+ -free HBSS to partially deplete the ER of Ca 2+ and sub-maximally activate SOCE (see ). Carbachol (CCh, 1 µM) was then added to stimulate IP 3 formation through muscarinic receptors, and extracellular Ca 2+ (2 mM) was then restored. Traces (mean ± s.e.m of 68–130 cells from three experiments) show responses with and without the CCh addition. ( C ) Summary results show the peak increases in [Ca 2+ ] c (Δ[Ca 2+ ] c ) after addition of CCh (CCh-induced Ca 2+ release) and then after restoring extracellular Ca 2+ (SOCE). ( D–F ) SH-SY5Y cells wild type (WT) ( D ) and expressing NS-shRNA ( E ) or IP 3 R1-shRNA ( F ) were treated with YM-254890 (YM, 1 µM, 5 min) in Ca 2+ -free HBSS to inhibit Gαq and then with thapsigargin (Tg, 1 µM) before restoring extracellular Ca 2+ (2 mM). Traces show mean ± s.e.m of ~120 cells from three experiments. ( G–I ) Similar analyses of HEK cells. Summary results (mean ± s.e.m, 50–100 cells from three experiments) are shown in ( I ). Different letter codes (panels C and I) indicate significantly different values within the store Ca 2+ release or SOCE groups, p<0.001, one-way ANOVA and pair-wise Tukey’s test. See also . Source data in . Figure 4—source data 1. Receptor-regulated IP 3 production stimulates SOCE in cells with empty Ca 2+ stores and expressing pore-dead IP 3 R.

Article Snippet: The primary antibodies used were to: IP 3 R1 (1:1000, ThermoFisher, Cat# PA1-901, RRID: AB_2129984 ); β-actin (1:5000, BD Biosciences, Cat# 612656, RRID: AB_2289199 ); STIM1 (1:1000, Cell Signaling Technology, Cat# 5668 S, RRID: AB_10828699 ); Orai1 (1:500, ProSci, Cat# PM-5205, RRID: AB_10941192 ); IP 3 R2 (1:1000, custom made by Pocono Rabbit Farm and Laboratory; ); and IP 3 R3 (1:500, BD Biosciences, Cat# 610313, RRID: AB_397705 ).

Techniques: Expressing, shRNA, Concentration Assay

( A–E ) PLA analyses of interactions between STIM1 and Orai1 in SH-SY5Y cells expressing NS-shRNA ( A ) or IP 3 R1-shRNA alone ( B ) or with IP 3 R1 ( C ), IP 3 R1 DA ( D ) or IP 3 R1 RQ/KQ ( E ). Confocal images are shown for control cells or after treatment with thapsigargin (Tg, 1 µM) in Ca 2+ -free HBSS. PLA reaction product is red, and nuclei are stained with DAPI (blue). Scale bars, 5 µm. Summary results show the surface area of the PLA spots for 8–10 cells from two independent analyses. Individual values, median (bar) and 25th and 75th percentiles (box). *** p < 0.001, Student’s t -test with unequal variances. See also . Source data in . Figure 5—source data 1. IP 3 Rs promote interaction of STIM1 with Orai1.

Journal: eLife

Article Title: Regulation of store-operated Ca 2+ entry by IP 3 receptors independent of their ability to release Ca 2+

doi: 10.7554/eLife.80447

Figure Lengend Snippet: ( A–E ) PLA analyses of interactions between STIM1 and Orai1 in SH-SY5Y cells expressing NS-shRNA ( A ) or IP 3 R1-shRNA alone ( B ) or with IP 3 R1 ( C ), IP 3 R1 DA ( D ) or IP 3 R1 RQ/KQ ( E ). Confocal images are shown for control cells or after treatment with thapsigargin (Tg, 1 µM) in Ca 2+ -free HBSS. PLA reaction product is red, and nuclei are stained with DAPI (blue). Scale bars, 5 µm. Summary results show the surface area of the PLA spots for 8–10 cells from two independent analyses. Individual values, median (bar) and 25th and 75th percentiles (box). *** p < 0.001, Student’s t -test with unequal variances. See also . Source data in . Figure 5—source data 1. IP 3 Rs promote interaction of STIM1 with Orai1.

Article Snippet: The primary antibodies used were to: IP 3 R1 (1:1000, ThermoFisher, Cat# PA1-901, RRID: AB_2129984 ); β-actin (1:5000, BD Biosciences, Cat# 612656, RRID: AB_2289199 ); STIM1 (1:1000, Cell Signaling Technology, Cat# 5668 S, RRID: AB_10828699 ); Orai1 (1:500, ProSci, Cat# PM-5205, RRID: AB_10941192 ); IP 3 R2 (1:1000, custom made by Pocono Rabbit Farm and Laboratory; ); and IP 3 R3 (1:500, BD Biosciences, Cat# 610313, RRID: AB_397705 ).

Techniques: Expressing, shRNA, Staining

( A–B ) Representative TIRF images of mVenus STIM1 co-transfected with either wild type mcherry-rat IP 3 R1 ( A ) or IP 3 R1 RQ/KQ (ligand binding mutant), ( B ) in wild type SH-SY5Y cells before (Basal) and after CPA induced store depletion (CPA treated) at 4 min and 7 min. On the right are shown RGB profile plots of STIM1 (green) and IP 3 R1, wild type or mutant (magenta) corresponding to the rectangular selections (Cell 1 and Cell 2). Scale bar is 10 µm.( C–D ) Changes in number of IP 3 R1 ( C ) and STIM1 ( D ) puncta upon CPA-induced store depletion over a period of 10 min in the indicated genotypes. Mean ± s.e.m from seven cells from n=6 independent experiments. ( E ) Summary result (mean ± s.e.m) showing the change in the number of maximum STIM1 puncta formed after CPA-induced store depletion in the indicated genotypes. Mean ± s.e.m. of seven cells from n=6 independent experiments. Different letters indicate significant differences, p<0.05, Mann-Whitney U-test. See also . Source data in . Figure 6—source data 1. Ligand-bound IP 3 R1 supports SOCE-dependent STIM1 movement to ER-PM contact sites.

Journal: eLife

Article Title: Regulation of store-operated Ca 2+ entry by IP 3 receptors independent of their ability to release Ca 2+

doi: 10.7554/eLife.80447

Figure Lengend Snippet: ( A–B ) Representative TIRF images of mVenus STIM1 co-transfected with either wild type mcherry-rat IP 3 R1 ( A ) or IP 3 R1 RQ/KQ (ligand binding mutant), ( B ) in wild type SH-SY5Y cells before (Basal) and after CPA induced store depletion (CPA treated) at 4 min and 7 min. On the right are shown RGB profile plots of STIM1 (green) and IP 3 R1, wild type or mutant (magenta) corresponding to the rectangular selections (Cell 1 and Cell 2). Scale bar is 10 µm.( C–D ) Changes in number of IP 3 R1 ( C ) and STIM1 ( D ) puncta upon CPA-induced store depletion over a period of 10 min in the indicated genotypes. Mean ± s.e.m from seven cells from n=6 independent experiments. ( E ) Summary result (mean ± s.e.m) showing the change in the number of maximum STIM1 puncta formed after CPA-induced store depletion in the indicated genotypes. Mean ± s.e.m. of seven cells from n=6 independent experiments. Different letters indicate significant differences, p<0.05, Mann-Whitney U-test. See also . Source data in . Figure 6—source data 1. Ligand-bound IP 3 R1 supports SOCE-dependent STIM1 movement to ER-PM contact sites.

Article Snippet: The primary antibodies used were to: IP 3 R1 (1:1000, ThermoFisher, Cat# PA1-901, RRID: AB_2129984 ); β-actin (1:5000, BD Biosciences, Cat# 612656, RRID: AB_2289199 ); STIM1 (1:1000, Cell Signaling Technology, Cat# 5668 S, RRID: AB_10828699 ); Orai1 (1:500, ProSci, Cat# PM-5205, RRID: AB_10941192 ); IP 3 R2 (1:1000, custom made by Pocono Rabbit Farm and Laboratory; ); and IP 3 R3 (1:500, BD Biosciences, Cat# 610313, RRID: AB_397705 ).

Techniques: Transfection, Ligand Binding Assay, Mutagenesis, MANN-WHITNEY

( A ) SOCE is activated when loss of Ca 2+ from the ER, usually mediated by opening of IP 3 Rs when they bind IP 3 , causes STIM to unfurl cytosolic domains (2). The exposed cytosolic domains of STIM1 reach across a narrow gap between the ER and PM at a MCS to interact with PIP 2 and Orai1 in the PM. Binding of STIM1 to Orai1 causes pore opening, and SOCE then occurs through the open Orai1 channel. We show that IP 3 Rs when they bind IP 3 also facilitate interactions between Orai1 and STIM, perhaps by stabilizing the MCS (1). Receptors that stimulate IP 3 formation thereby promote both activation of STIM (by emptying Ca 2+ stores) and independently promote interaction of active STIM1 with Orai1. ( B ) Other mechanisms, including ryanodine receptors (RyR), can also release Ca 2+ from the ER. We suggest that convergent regulation of SOCE by IP 3 R with bound IP 3 allows receptors that stimulate IP 3 formation to selectively control SOCE.

Journal: eLife

Article Title: Regulation of store-operated Ca 2+ entry by IP 3 receptors independent of their ability to release Ca 2+

doi: 10.7554/eLife.80447

Figure Lengend Snippet: ( A ) SOCE is activated when loss of Ca 2+ from the ER, usually mediated by opening of IP 3 Rs when they bind IP 3 , causes STIM to unfurl cytosolic domains (2). The exposed cytosolic domains of STIM1 reach across a narrow gap between the ER and PM at a MCS to interact with PIP 2 and Orai1 in the PM. Binding of STIM1 to Orai1 causes pore opening, and SOCE then occurs through the open Orai1 channel. We show that IP 3 Rs when they bind IP 3 also facilitate interactions between Orai1 and STIM, perhaps by stabilizing the MCS (1). Receptors that stimulate IP 3 formation thereby promote both activation of STIM (by emptying Ca 2+ stores) and independently promote interaction of active STIM1 with Orai1. ( B ) Other mechanisms, including ryanodine receptors (RyR), can also release Ca 2+ from the ER. We suggest that convergent regulation of SOCE by IP 3 R with bound IP 3 allows receptors that stimulate IP 3 formation to selectively control SOCE.

Article Snippet: The primary antibodies used were to: IP 3 R1 (1:1000, ThermoFisher, Cat# PA1-901, RRID: AB_2129984 ); β-actin (1:5000, BD Biosciences, Cat# 612656, RRID: AB_2289199 ); STIM1 (1:1000, Cell Signaling Technology, Cat# 5668 S, RRID: AB_10828699 ); Orai1 (1:500, ProSci, Cat# PM-5205, RRID: AB_10941192 ); IP 3 R2 (1:1000, custom made by Pocono Rabbit Farm and Laboratory; ); and IP 3 R3 (1:500, BD Biosciences, Cat# 610313, RRID: AB_397705 ).

Techniques: Binding Assay, Activation Assay

Loss of IP 3 Rs Causes Misalignment of Mitotic Spindles (A) Typical projections of confocal z stacks from cells stained for chromosomes (blue), α-tubulin (green), and γ-tubulin (red) show spindle angles (α) during metaphase for a WT and HEK-IP 3 R-KO cell. Dashed lines show substratum. Scale bars: 10 μm. (B) Spindle angles for WT and HEK-IP 3 R-KO cells (individual values, means ± SD from five experiments). ∗∗ p < 0.01, Student’s t test. (C) Frequency distribution of spindle angles (n = 68–71 cells, from five experiments). ∗∗∗ p < 0.001, χ 2 test for trend. (D) Typical western blots (WBs) for IP 3 R subtypes in HEK cells treated with siRNAs to all three IP 3 R subtypes or non-silencing (NS) siRNA. (E) Summary results show IP 3 R expression determined by quantification of WB for cells treated with IP 3 R siRNA relative to NS siRNA (%, means ± SD, n = 4). (F) Spindle angles for matched comparisons of WT and HEK-IP 3 R-KO cells and cells treated with NS or IP 3 R siRNA (individual values, means ± SD from five experiments). ∗ p < 0.05, ∗∗ p < 0.01, ∗∗∗ p < 0.001, ANOVA with Bonferroni test. (G) Frequency distributions of spindle angles for cells (WT or IP 3 R-KO) treated with NS or IP 3 R siRNA (n = 64–75 cells, from five experiments). ∗∗∗ p < 0.001, ∗ p < 0.05, relative to WT with NS siRNA, χ 2 test for trend. (H) Cross-sections through 3D reconstructions of confocal z stack images of mitotic HEK cells expressing EGFP-IP 3 R3 or untagged IP 3 R3, immunostained for IP 3 R3 (red) and showing chromosomes (DAPI, blue) and γ-tubulin (white). Scale bars: 10 μm. (I) Spindle angles for WT and HEK-IP 3 R-KO cells transiently expressing IP 3 R3 or EGFP-IP 3 R3. Results (individual values, means ± SD, from five experiments). ∗ p < 0.05, ∗∗ p < 0.01, ANOVA with Bonferroni test. (J) Frequency distributions of spindle angles (n = 53–65 cells, from five experiments). ∗∗∗ p < 0.001, relative to WT; +++ p < 0.001, relative to IP 3 R-KO, χ 2 test for trend. See also and and .

Journal: Cell Reports

Article Title: Ca 2+ Release by IP 3 Receptors Is Required to Orient the Mitotic Spindle

doi: 10.1016/j.celrep.2020.108483

Figure Lengend Snippet: Loss of IP 3 Rs Causes Misalignment of Mitotic Spindles (A) Typical projections of confocal z stacks from cells stained for chromosomes (blue), α-tubulin (green), and γ-tubulin (red) show spindle angles (α) during metaphase for a WT and HEK-IP 3 R-KO cell. Dashed lines show substratum. Scale bars: 10 μm. (B) Spindle angles for WT and HEK-IP 3 R-KO cells (individual values, means ± SD from five experiments). ∗∗ p < 0.01, Student’s t test. (C) Frequency distribution of spindle angles (n = 68–71 cells, from five experiments). ∗∗∗ p < 0.001, χ 2 test for trend. (D) Typical western blots (WBs) for IP 3 R subtypes in HEK cells treated with siRNAs to all three IP 3 R subtypes or non-silencing (NS) siRNA. (E) Summary results show IP 3 R expression determined by quantification of WB for cells treated with IP 3 R siRNA relative to NS siRNA (%, means ± SD, n = 4). (F) Spindle angles for matched comparisons of WT and HEK-IP 3 R-KO cells and cells treated with NS or IP 3 R siRNA (individual values, means ± SD from five experiments). ∗ p < 0.05, ∗∗ p < 0.01, ∗∗∗ p < 0.001, ANOVA with Bonferroni test. (G) Frequency distributions of spindle angles for cells (WT or IP 3 R-KO) treated with NS or IP 3 R siRNA (n = 64–75 cells, from five experiments). ∗∗∗ p < 0.001, ∗ p < 0.05, relative to WT with NS siRNA, χ 2 test for trend. (H) Cross-sections through 3D reconstructions of confocal z stack images of mitotic HEK cells expressing EGFP-IP 3 R3 or untagged IP 3 R3, immunostained for IP 3 R3 (red) and showing chromosomes (DAPI, blue) and γ-tubulin (white). Scale bars: 10 μm. (I) Spindle angles for WT and HEK-IP 3 R-KO cells transiently expressing IP 3 R3 or EGFP-IP 3 R3. Results (individual values, means ± SD, from five experiments). ∗ p < 0.05, ∗∗ p < 0.01, ANOVA with Bonferroni test. (J) Frequency distributions of spindle angles (n = 53–65 cells, from five experiments). ∗∗∗ p < 0.001, relative to WT; +++ p < 0.001, relative to IP 3 R-KO, χ 2 test for trend. See also and and .

Article Snippet: IP 3 R2 siRNA , QIAGEN , cat# Hs_ITPR2_1 FlexiTube siRNA (SI00034552).

Techniques: Staining, Western Blot, Expressing

Journal: Cell Reports

Article Title: Ca 2+ Release by IP 3 Receptors Is Required to Orient the Mitotic Spindle

doi: 10.1016/j.celrep.2020.108483

Figure Lengend Snippet:

Article Snippet: IP 3 R2 siRNA , QIAGEN , cat# Hs_ITPR2_1 FlexiTube siRNA (SI00034552).

Techniques: Western Blot, Immunocytochemistry, Recombinant, Protease Inhibitor, Modification, SDS-Gel, Mutagenesis, Plasmid Preparation, Software, Microscopy

Relative IP 3 R2 gene expression is increased in models of neurodegeneration and inflammation. ( A ) Relative gene expression of IP 3 R2 assessed by qPCR on ventral spinal cords of non-transgenic (ntg; n = 6), SOD1 WT (wt; n = 6), pre-symptomatic SOD1 G93A (pre-s; n = 6), symptomatic SOD1 G93A (s; n = 5) and end stage SOD1 G93A (es; n = 5) mice (ANOVA, Bonferroni post-hoc). ( B ) Relative IP 3 R2 gene expression analysed in the lumbar spinal cord of severely affected EAE-mice ( n = 3) and control mice ( n = 6) by qPCR (unpaired t- test). ( C ) Relative IP 3 R2 gene expression analysed in the penumbra zone of stroke in mice ( n = 4) and a similar region in the contralateral side of the brain by qPCR (paired t -test). ( D ) Relative IP 3 R2 gene expression in ventral spinal cord astrocytes in vitro by 24 h LPS application ( n = 8) or vehicle ( n = 8; unpaired t -test). ( E ) Relative IP 3 R2 gene expression in murine macrophages ( n = 4; Wilcoxon signed rank test compared to 1.0, two-tailed). The dotted line reflects the normalising vehicle condition set at 1. Mean ± standard deviation. * P < 0.05, ** P < 0.01, *** P < 0.001, **** P < 0.0001.

Journal: Human Molecular Genetics

Article Title: Genetic ablation of IP 3 receptor 2 increases cytokines and decreases survival of SOD1 G93A mice

doi: 10.1093/hmg/ddw190

Figure Lengend Snippet: Relative IP 3 R2 gene expression is increased in models of neurodegeneration and inflammation. ( A ) Relative gene expression of IP 3 R2 assessed by qPCR on ventral spinal cords of non-transgenic (ntg; n = 6), SOD1 WT (wt; n = 6), pre-symptomatic SOD1 G93A (pre-s; n = 6), symptomatic SOD1 G93A (s; n = 5) and end stage SOD1 G93A (es; n = 5) mice (ANOVA, Bonferroni post-hoc). ( B ) Relative IP 3 R2 gene expression analysed in the lumbar spinal cord of severely affected EAE-mice ( n = 3) and control mice ( n = 6) by qPCR (unpaired t- test). ( C ) Relative IP 3 R2 gene expression analysed in the penumbra zone of stroke in mice ( n = 4) and a similar region in the contralateral side of the brain by qPCR (paired t -test). ( D ) Relative IP 3 R2 gene expression in ventral spinal cord astrocytes in vitro by 24 h LPS application ( n = 8) or vehicle ( n = 8; unpaired t -test). ( E ) Relative IP 3 R2 gene expression in murine macrophages ( n = 4; Wilcoxon signed rank test compared to 1.0, two-tailed). The dotted line reflects the normalising vehicle condition set at 1. Mean ± standard deviation. * P < 0.05, ** P < 0.01, *** P < 0.001, **** P < 0.0001.

Article Snippet: IP 3 R2 knockout mice, described previously , were intercrossed with high-copy number SOD1 G93A (The Jackson Laboratory, Bar Harbor, USA).

Techniques: Gene Expression, Transgenic Assay, Control, In Vitro, Two Tailed Test, Standard Deviation

IP 3 R2 knockout exacerbates disease in SOD1 G93A mice. Relative gene expression of IP 3 R1 ( A ), IP 3 R2 ( B ) and IP 3 R3 ( C ) assessed by qPCR in ventral spinal cords of IP 3 R2 +/+ ( n = 6), IP 3 R2 +/- ( n = 6) and IP 3 R2 -/- ( n = 6) mice. ( D ) Early symptom onset as determined by the hanging wire test between IP 3 R2 +/+ SOD1 G93A ( n = 6; 129.7 ± 8.6 days), IP 3 R2 +/- SOD1 G93A ( n = 7; 126.8 ± 9.1 days) and IP 3 R2 -/- SOD1 G93A mice ( n = 7; 126.4 ± 8.1 days, Log-rank, P = 0.88). ( E ) Late symptom onset as determined by the rotarod test between IP 3 R2 +/+ SOD1 G93A ( n = 6; 141.2 ± 5.1 days), IP 3 R2 +/- SOD1 G93A ( n = 7; 142.6 ± 5.4 days) and IP 3 R2 -/- SOD1 G93A mice ( n = 7; 138.7 ± 6.0 days, Log-rank, P = 0.55). ( F ) Survival analysis by determining the age of end stage of IP 3 R2 +/+ SOD1 G93A ( n = 19; 170.7 ± 9.6 days), IP 3 R2 +/- SOD1 G93A (n= 17; 162.8 ± 9.6 days) and IP 3 R2 -/- SOD1 G93A ( n = 18; 153.2 ± 12.5 days; Log-rank, P < 0.0001). ( G-H ) Disease progression as measured by grip strength of IP 3 R2 +/+ SOD1 G93A mice ( n = 5), IP 3 R2 +/- SOD1 G93A mice ( n = 7), IP 3 R2 -/- SOD1 G93A mice ( n = 6) and IP 3 R2 -/- mice ( n = 4) for the fore limbs (G) and all limbs (H). ( I ) Quantification of neurons from lumbar spinal cord in adult IP 3 R2 +/+ ( n = 3) , IP 3 R2 -/- ( n = 3) and 145 day old IP 3 R2 +/+ SOD1 G93A ( n = 3) and IP 3 R2 -/- SOD1 G93A mice ( n = 2; 2-way ANOVA disease stage P = 0.0061). ( J ) The viability of murine motor neurons isolated from IP 3 R2 -/- ( n = 4) and non-transgenic ( n = 4) plated on non-transgenic rat astrocytic feeder layers in serum-enriched media. Mean ± standard deviation.

Journal: Human Molecular Genetics

Article Title: Genetic ablation of IP 3 receptor 2 increases cytokines and decreases survival of SOD1 G93A mice

doi: 10.1093/hmg/ddw190

Figure Lengend Snippet: IP 3 R2 knockout exacerbates disease in SOD1 G93A mice. Relative gene expression of IP 3 R1 ( A ), IP 3 R2 ( B ) and IP 3 R3 ( C ) assessed by qPCR in ventral spinal cords of IP 3 R2 +/+ ( n = 6), IP 3 R2 +/- ( n = 6) and IP 3 R2 -/- ( n = 6) mice. ( D ) Early symptom onset as determined by the hanging wire test between IP 3 R2 +/+ SOD1 G93A ( n = 6; 129.7 ± 8.6 days), IP 3 R2 +/- SOD1 G93A ( n = 7; 126.8 ± 9.1 days) and IP 3 R2 -/- SOD1 G93A mice ( n = 7; 126.4 ± 8.1 days, Log-rank, P = 0.88). ( E ) Late symptom onset as determined by the rotarod test between IP 3 R2 +/+ SOD1 G93A ( n = 6; 141.2 ± 5.1 days), IP 3 R2 +/- SOD1 G93A ( n = 7; 142.6 ± 5.4 days) and IP 3 R2 -/- SOD1 G93A mice ( n = 7; 138.7 ± 6.0 days, Log-rank, P = 0.55). ( F ) Survival analysis by determining the age of end stage of IP 3 R2 +/+ SOD1 G93A ( n = 19; 170.7 ± 9.6 days), IP 3 R2 +/- SOD1 G93A (n= 17; 162.8 ± 9.6 days) and IP 3 R2 -/- SOD1 G93A ( n = 18; 153.2 ± 12.5 days; Log-rank, P < 0.0001). ( G-H ) Disease progression as measured by grip strength of IP 3 R2 +/+ SOD1 G93A mice ( n = 5), IP 3 R2 +/- SOD1 G93A mice ( n = 7), IP 3 R2 -/- SOD1 G93A mice ( n = 6) and IP 3 R2 -/- mice ( n = 4) for the fore limbs (G) and all limbs (H). ( I ) Quantification of neurons from lumbar spinal cord in adult IP 3 R2 +/+ ( n = 3) , IP 3 R2 -/- ( n = 3) and 145 day old IP 3 R2 +/+ SOD1 G93A ( n = 3) and IP 3 R2 -/- SOD1 G93A mice ( n = 2; 2-way ANOVA disease stage P = 0.0061). ( J ) The viability of murine motor neurons isolated from IP 3 R2 -/- ( n = 4) and non-transgenic ( n = 4) plated on non-transgenic rat astrocytic feeder layers in serum-enriched media. Mean ± standard deviation.

Article Snippet: IP 3 R2 knockout mice, described previously , were intercrossed with high-copy number SOD1 G93A (The Jackson Laboratory, Bar Harbor, USA).

Techniques: Knock-Out, Gene Expression, Biomarker Discovery, Isolation, Transgenic Assay, Standard Deviation