hea version 1.2 beadchip microarray Search Results


atcc 3502 cdss  (ATCC)
96
ATCC atcc 3502 cdss
Atcc 3502 Cdss, supplied by ATCC, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 96 stars, based on 1 article reviews
atcc 3502 cdss - by Bioz Stars, 2026-05
96/100 stars
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maui system  (BioMicro Systems Inc)
90
BioMicro Systems Inc maui system
Maui System, supplied by BioMicro Systems Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/maui system/product/BioMicro Systems Inc
Average 90 stars, based on 1 article reviews
maui system - by Bioz Stars, 2026-05
90/100 stars
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genopal dna chip  (Mitsubishi Rayon CO)
90
Mitsubishi Rayon CO genopal dna chip
Genopal Dna Chip, supplied by Mitsubishi Rayon CO, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
genopal dna chip - by Bioz Stars, 2026-05
90/100 stars
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dna microarrays  (Thermo Fisher)
99
Thermo Fisher dna microarrays
Dna Microarrays, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/dna microarrays/product/Thermo Fisher
Average 99 stars, based on 1 article reviews
dna microarrays - by Bioz Stars, 2026-05
99/100 stars
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pam50 rt-qpcr research assay  (Huntsman International LLC)
90
Huntsman International LLC pam50 rt-qpcr research assay
Example Utah high-risk breast cancer pedigree 1817. a. Confirmed and sampled breast cancer cases are indicated in black (55 sampled out of 138 total confirmed UCR cases). Star, triangle and hexagon symbols indicate pedigree branches. b. shows only those cases from (a) with tumor expression data available and indicates <t>PAM50</t> intrinsic subtype by color. Cases whose tumors are extreme for PC3 are indicated by ‘3’; extreme for PC5 are indicated by ‘5’. c. shows only the PC3-extreme cases from (b). A ‘+’ indicates those cases that share the genomewide significant region at 12q15.
Pam50 Rt Qpcr Research Assay, supplied by Huntsman International LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/pam50 rt-qpcr research assay/product/Huntsman International LLC
Average 90 stars, based on 1 article reviews
pam50 rt-qpcr research assay - by Bioz Stars, 2026-05
90/100 stars
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nupage novex bis tris gel  (Thermo Fisher)
99
Thermo Fisher nupage novex bis tris gel
Example Utah high-risk breast cancer pedigree 1817. a. Confirmed and sampled breast cancer cases are indicated in black (55 sampled out of 138 total confirmed UCR cases). Star, triangle and hexagon symbols indicate pedigree branches. b. shows only those cases from (a) with tumor expression data available and indicates <t>PAM50</t> intrinsic subtype by color. Cases whose tumors are extreme for PC3 are indicated by ‘3’; extreme for PC5 are indicated by ‘5’. c. shows only the PC3-extreme cases from (b). A ‘+’ indicates those cases that share the genomewide significant region at 12q15.
Nupage Novex Bis Tris Gel, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/nupage novex bis tris gel/product/Thermo Fisher
Average 99 stars, based on 1 article reviews
nupage novex bis tris gel - by Bioz Stars, 2026-05
99/100 stars
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pamchip® 12 protein tyrosine (ptk) peptide microarray system  (PamGene International B.V)
90
PamGene International B.V pamchip® 12 protein tyrosine (ptk) peptide microarray system
Example Utah high-risk breast cancer pedigree 1817. a. Confirmed and sampled breast cancer cases are indicated in black (55 sampled out of 138 total confirmed UCR cases). Star, triangle and hexagon symbols indicate pedigree branches. b. shows only those cases from (a) with tumor expression data available and indicates <t>PAM50</t> intrinsic subtype by color. Cases whose tumors are extreme for PC3 are indicated by ‘3’; extreme for PC5 are indicated by ‘5’. c. shows only the PC3-extreme cases from (b). A ‘+’ indicates those cases that share the genomewide significant region at 12q15.
Pamchip® 12 Protein Tyrosine (Ptk) Peptide Microarray System, supplied by PamGene International B.V, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/pamchip® 12 protein tyrosine (ptk) peptide microarray system/product/PamGene International B.V
Average 90 stars, based on 1 article reviews
pamchip® 12 protein tyrosine (ptk) peptide microarray system - by Bioz Stars, 2026-05
90/100 stars
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ncbi gene expression omnibus  (Biotechnology Information)
86
Biotechnology Information ncbi gene expression omnibus
Example Utah high-risk breast cancer pedigree 1817. a. Confirmed and sampled breast cancer cases are indicated in black (55 sampled out of 138 total confirmed UCR cases). Star, triangle and hexagon symbols indicate pedigree branches. b. shows only those cases from (a) with tumor expression data available and indicates <t>PAM50</t> intrinsic subtype by color. Cases whose tumors are extreme for PC3 are indicated by ‘3’; extreme for PC5 are indicated by ‘5’. c. shows only the PC3-extreme cases from (b). A ‘+’ indicates those cases that share the genomewide significant region at 12q15.
Ncbi Gene Expression Omnibus, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/ncbi gene expression omnibus/product/Biotechnology Information
Average 86 stars, based on 1 article reviews
ncbi gene expression omnibus - by Bioz Stars, 2026-05
86/100 stars
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gene exp ntrk3 mm01317842 m1  (Thermo Fisher)
85
Thermo Fisher gene exp ntrk3 mm01317842 m1
Bar graphs and color coded heatmaps illustrating relative transcript levels in Ts65Dn (n = 9) and 2N (n = 7) mice at 4-9 months of age in CA1 neurons. (A) Several neurotrophins and cognate neurotrophin receptors displayed downregulation, including CNTF, NTF4/5, p75NTR, TrkA, TrkB, and <t>TrkC</t> (B) No significant changes in GluR subunits were observed. (C) Alterations in AD-related transcripts included SAA4, KCNIP3, MAPT4, and NPC2 (*p < 0.01), (**p < 0.005), and (*** p < 0.001) (t= trend 0.02< p < 0.05). Error bars indicate standard error of the mean (SEM).
Gene Exp Ntrk3 Mm01317842 M1, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 85/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/gene exp ntrk3 mm01317842 m1/product/Thermo Fisher
Average 85 stars, based on 1 article reviews
gene exp ntrk3 mm01317842 m1 - by Bioz Stars, 2026-05
85/100 stars
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total human 1.2 cdna microarray  (Becton Dickinson)
90
Becton Dickinson total human 1.2 cdna microarray
Bar graphs and color coded heatmaps illustrating relative transcript levels in Ts65Dn (n = 9) and 2N (n = 7) mice at 4-9 months of age in CA1 neurons. (A) Several neurotrophins and cognate neurotrophin receptors displayed downregulation, including CNTF, NTF4/5, p75NTR, TrkA, TrkB, and <t>TrkC</t> (B) No significant changes in GluR subunits were observed. (C) Alterations in AD-related transcripts included SAA4, KCNIP3, MAPT4, and NPC2 (*p < 0.01), (**p < 0.005), and (*** p < 0.001) (t= trend 0.02< p < 0.05). Error bars indicate standard error of the mean (SEM).
Total Human 1.2 Cdna Microarray, supplied by Becton Dickinson, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/total human 1.2 cdna microarray/product/Becton Dickinson
Average 90 stars, based on 1 article reviews
total human 1.2 cdna microarray - by Bioz Stars, 2026-05
90/100 stars
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maui hybridization system  (BioMicro Systems Inc)
90
BioMicro Systems Inc maui hybridization system
Bar graphs and color coded heatmaps illustrating relative transcript levels in Ts65Dn (n = 9) and 2N (n = 7) mice at 4-9 months of age in CA1 neurons. (A) Several neurotrophins and cognate neurotrophin receptors displayed downregulation, including CNTF, NTF4/5, p75NTR, TrkA, TrkB, and <t>TrkC</t> (B) No significant changes in GluR subunits were observed. (C) Alterations in AD-related transcripts included SAA4, KCNIP3, MAPT4, and NPC2 (*p < 0.01), (**p < 0.005), and (*** p < 0.001) (t= trend 0.02< p < 0.05). Error bars indicate standard error of the mean (SEM).
Maui Hybridization System, supplied by BioMicro Systems Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/maui hybridization system/product/BioMicro Systems Inc
Average 90 stars, based on 1 article reviews
maui hybridization system - by Bioz Stars, 2026-05
90/100 stars
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strain 43617  (ATCC)
92
ATCC strain 43617
Bar graphs and color coded heatmaps illustrating relative transcript levels in Ts65Dn (n = 9) and 2N (n = 7) mice at 4-9 months of age in CA1 neurons. (A) Several neurotrophins and cognate neurotrophin receptors displayed downregulation, including CNTF, NTF4/5, p75NTR, TrkA, TrkB, and <t>TrkC</t> (B) No significant changes in GluR subunits were observed. (C) Alterations in AD-related transcripts included SAA4, KCNIP3, MAPT4, and NPC2 (*p < 0.01), (**p < 0.005), and (*** p < 0.001) (t= trend 0.02< p < 0.05). Error bars indicate standard error of the mean (SEM).
Strain 43617, supplied by ATCC, used in various techniques. Bioz Stars score: 92/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/strain 43617/product/ATCC
Average 92 stars, based on 1 article reviews
strain 43617 - by Bioz Stars, 2026-05
92/100 stars
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Image Search Results


Example Utah high-risk breast cancer pedigree 1817. a. Confirmed and sampled breast cancer cases are indicated in black (55 sampled out of 138 total confirmed UCR cases). Star, triangle and hexagon symbols indicate pedigree branches. b. shows only those cases from (a) with tumor expression data available and indicates PAM50 intrinsic subtype by color. Cases whose tumors are extreme for PC3 are indicated by ‘3’; extreme for PC5 are indicated by ‘5’. c. shows only the PC3-extreme cases from (b). A ‘+’ indicates those cases that share the genomewide significant region at 12q15.

Journal: Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology

Article Title: Reparameterization of PAM50 expression identifies novel breast tumor dimensions and leads to discovery of a genomewide significant breast cancer locus at 12q15

doi: 10.1158/1055-9965.EPI-17-0887

Figure Lengend Snippet: Example Utah high-risk breast cancer pedigree 1817. a. Confirmed and sampled breast cancer cases are indicated in black (55 sampled out of 138 total confirmed UCR cases). Star, triangle and hexagon symbols indicate pedigree branches. b. shows only those cases from (a) with tumor expression data available and indicates PAM50 intrinsic subtype by color. Cases whose tumors are extreme for PC3 are indicated by ‘3’; extreme for PC5 are indicated by ‘5’. c. shows only the PC3-extreme cases from (b). A ‘+’ indicates those cases that share the genomewide significant region at 12q15.

Article Snippet: Gene expression data was generated using the PAM50 RT-qPCR research assay( 12 ) in the Bernard Lab at the Huntsman Cancer Institute( 15 ).

Techniques: Expressing

Summary of the 11 high-risk Utah pedigrees Tumor count by intrinsic subtype per pedigree.

Journal: Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology

Article Title: Reparameterization of PAM50 expression identifies novel breast tumor dimensions and leads to discovery of a genomewide significant breast cancer locus at 12q15

doi: 10.1158/1055-9965.EPI-17-0887

Figure Lengend Snippet: Summary of the 11 high-risk Utah pedigrees Tumor count by intrinsic subtype per pedigree.

Article Snippet: Gene expression data was generated using the PAM50 RT-qPCR research assay( 12 ) in the Bernard Lab at the Huntsman Cancer Institute( 15 ).

Techniques:

A slice from a three-dimensional scatterplot of PC1, PC2, and PC4 shows that they recapitulate the PAM50 intrinsic subtypes. Reinforcing the constrasts illustrated in Figure 2, PC1 here clearly distinguishes Basal-like from Luminal A tumors. PC2 and PC4 aid in distinguishing HER2-enriched from Luminal B tumors. Combined, these three components define clusters corresponding to the intrinsic subtypes.

Journal: Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology

Article Title: Reparameterization of PAM50 expression identifies novel breast tumor dimensions and leads to discovery of a genomewide significant breast cancer locus at 12q15

doi: 10.1158/1055-9965.EPI-17-0887

Figure Lengend Snippet: A slice from a three-dimensional scatterplot of PC1, PC2, and PC4 shows that they recapitulate the PAM50 intrinsic subtypes. Reinforcing the constrasts illustrated in Figure 2, PC1 here clearly distinguishes Basal-like from Luminal A tumors. PC2 and PC4 aid in distinguishing HER2-enriched from Luminal B tumors. Combined, these three components define clusters corresponding to the intrinsic subtypes.

Article Snippet: Gene expression data was generated using the PAM50 RT-qPCR research assay( 12 ) in the Bernard Lab at the Huntsman Cancer Institute( 15 ).

Techniques:

Bar graphs and color coded heatmaps illustrating relative transcript levels in Ts65Dn (n = 9) and 2N (n = 7) mice at 4-9 months of age in CA1 neurons. (A) Several neurotrophins and cognate neurotrophin receptors displayed downregulation, including CNTF, NTF4/5, p75NTR, TrkA, TrkB, and TrkC (B) No significant changes in GluR subunits were observed. (C) Alterations in AD-related transcripts included SAA4, KCNIP3, MAPT4, and NPC2 (*p < 0.01), (**p < 0.005), and (*** p < 0.001) (t= trend 0.02< p < 0.05). Error bars indicate standard error of the mean (SEM).

Journal: The Journal of comparative neurology

Article Title: Expression profile analysis of vulnerable CA1 pyramidal neurons in young-middle aged Ts65Dn mice

doi: 10.1002/cne.23663

Figure Lengend Snippet: Bar graphs and color coded heatmaps illustrating relative transcript levels in Ts65Dn (n = 9) and 2N (n = 7) mice at 4-9 months of age in CA1 neurons. (A) Several neurotrophins and cognate neurotrophin receptors displayed downregulation, including CNTF, NTF4/5, p75NTR, TrkA, TrkB, and TrkC (B) No significant changes in GluR subunits were observed. (C) Alterations in AD-related transcripts included SAA4, KCNIP3, MAPT4, and NPC2 (*p < 0.01), (**p < 0.005), and (*** p < 0.001) (t= trend 0.02< p < 0.05). Error bars indicate standard error of the mean (SEM).

Article Snippet: Taqman qPCR primers (Life Technologies) were utilized for qPCR, TrkB (Mm01341760_m1; targeting the exon 16-17 boundary), TrkC (Mm01317842_m1; targeting the exon 12-13 boundary), NTF3 (Mm00435413_s1; targeting exon 3), BDNF (Mm04230607_s1; targeting exon 8) and the housekeeping gene succinate dehydrogenase complex, subunit A, flavoprotein (SDHA; Mm01352360_m1; targeting the exon 14-15 boundary).

Techniques:

(A) BDNF showed no difference in mRNA expression levels, however, the BDNF receptor TrkB (NTRK2) showed significant downregulation, in accordance with the microarray results. NTF3 showed a trend for downregulation and the NTF3 receptor TrkC (NTRK3) was significantly downregulated. ddCT was expressed as percent of 2N control for all qPCR results. Key, (* p < 0.05) and (t p < 0.1). Error bars indicate SEM.

Journal: The Journal of comparative neurology

Article Title: Expression profile analysis of vulnerable CA1 pyramidal neurons in young-middle aged Ts65Dn mice

doi: 10.1002/cne.23663

Figure Lengend Snippet: (A) BDNF showed no difference in mRNA expression levels, however, the BDNF receptor TrkB (NTRK2) showed significant downregulation, in accordance with the microarray results. NTF3 showed a trend for downregulation and the NTF3 receptor TrkC (NTRK3) was significantly downregulated. ddCT was expressed as percent of 2N control for all qPCR results. Key, (* p < 0.05) and (t p < 0.1). Error bars indicate SEM.

Article Snippet: Taqman qPCR primers (Life Technologies) were utilized for qPCR, TrkB (Mm01341760_m1; targeting the exon 16-17 boundary), TrkC (Mm01317842_m1; targeting the exon 12-13 boundary), NTF3 (Mm00435413_s1; targeting exon 3), BDNF (Mm04230607_s1; targeting exon 8) and the housekeeping gene succinate dehydrogenase complex, subunit A, flavoprotein (SDHA; Mm01352360_m1; targeting the exon 14-15 boundary).

Techniques: Expressing, Microarray

Immunoblot analysis using regional hippocampal dissections was performed to assess whether selected transcriptional alterations resulted in commensurate protein level changes in Ts65Dn mice compared to 2N littermates at 4-6 months of age. (A) Representative immunoblots for pro-BDNF, mature BDNF, NTF3, TrkB-FL, TrkB-T1, TrkC-FL, and TrkC-T1. β-tubulin (TUBB) expression was used as a loading control. (B) Normalized expression levels compared to TUBB expression show upregulation of pro-BDNF (p<0.02), a trend towards downregulation of TrkB-FL (p =0.09) and TrkC-T1 (p= 0.069), but no significant changes in NTF3, mature BDNF, TrkB-T1 and TrkC-FL expression. Key: 2N black, Ts65Dn grey.

Journal: The Journal of comparative neurology

Article Title: Expression profile analysis of vulnerable CA1 pyramidal neurons in young-middle aged Ts65Dn mice

doi: 10.1002/cne.23663

Figure Lengend Snippet: Immunoblot analysis using regional hippocampal dissections was performed to assess whether selected transcriptional alterations resulted in commensurate protein level changes in Ts65Dn mice compared to 2N littermates at 4-6 months of age. (A) Representative immunoblots for pro-BDNF, mature BDNF, NTF3, TrkB-FL, TrkB-T1, TrkC-FL, and TrkC-T1. β-tubulin (TUBB) expression was used as a loading control. (B) Normalized expression levels compared to TUBB expression show upregulation of pro-BDNF (p<0.02), a trend towards downregulation of TrkB-FL (p =0.09) and TrkC-T1 (p= 0.069), but no significant changes in NTF3, mature BDNF, TrkB-T1 and TrkC-FL expression. Key: 2N black, Ts65Dn grey.

Article Snippet: Taqman qPCR primers (Life Technologies) were utilized for qPCR, TrkB (Mm01341760_m1; targeting the exon 16-17 boundary), TrkC (Mm01317842_m1; targeting the exon 12-13 boundary), NTF3 (Mm00435413_s1; targeting exon 3), BDNF (Mm04230607_s1; targeting exon 8) and the housekeeping gene succinate dehydrogenase complex, subunit A, flavoprotein (SDHA; Mm01352360_m1; targeting the exon 14-15 boundary).

Techniques: Western Blot, Expressing