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genbank accession no. nm_152490  (Biotechnology Information)
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Biotechnology Information genbank accession no. nm_152490
Genbank Accession No. Nm 152490, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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genbank accession no  (Protein Potential)
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Protein Potential genbank accession no
Genbank Accession No, supplied by Protein Potential, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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6x his-tagged helicobacter pylori nonheme iron-containing ferritin genbank accession no. np223316  (Sangon Biotech)
90
Sangon Biotech 6x his-tagged helicobacter pylori nonheme iron-containing ferritin genbank accession no. np223316
6x His Tagged Helicobacter Pylori Nonheme Iron Containing Ferritin Genbank Accession No. Np223316, supplied by Sangon Biotech, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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national center for biotechnology information genbank accession no. nm_174990  (Biotechnology Information)
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Biotechnology Information national center for biotechnology information genbank accession no. nm_174990
National Center For Biotechnology Information Genbank Accession No. Nm 174990, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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genbank accession no. kp090294  (Biotechnology Information)
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Biotechnology Information genbank accession no. kp090294
Genbank Accession No. Kp090294, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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genbank accession no. nm—004360  (Unigene)
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Unigene genbank accession no. nm—004360
Genbank Accession No. Nm—004360, supplied by Unigene, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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shmks2 (genbank accession no. adk38536)  (GenScript corporation)
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GenScript corporation shmks2 (genbank accession no. adk38536)
Shmks2 (Genbank Accession No. Adk38536), supplied by GenScript corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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fatb1 from umbellularia californica (uc fatb1; genbank accession no. q41635)  (GenScript corporation)
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GenScript corporation fatb1 from umbellularia californica (uc fatb1; genbank accession no. q41635)
Fatb1 From Umbellularia Californica (Uc Fatb1; Genbank Accession No. Q41635), supplied by GenScript corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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gapdh (genbank accession no. m33197)  (Nihon Gene Research Laboratories)
90
Nihon Gene Research Laboratories gapdh (genbank accession no. m33197)
Gapdh (Genbank Accession No. M33197), supplied by Nihon Gene Research Laboratories, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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genbank accession no. jq710684  (Biotechnology Information)
90
Biotechnology Information genbank accession no. jq710684
Genbank Accession No. Jq710684, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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genbank accession no. mt042778.1  (Biotechnology Information)
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Biotechnology Information genbank accession no. mt042778.1
Phylogenetic trees and multiple sequence alignments of COVID-19 RdRp. (A) Phylogenetic tree using ClustalW software and (B) multiple sequence alignment using CLUSTAL 2.1 based on amino acid sequences of COVID-19 nsp 12 <t>(GenBank</t> accession no. YP_009725307.1), SARS rep (UniProtKB accession no. R1AB_CVHSA), influenza A PB1 (GenBank accession no. AAK18013.1) and T7 Bacteriophage (T7 Phage) PHA (PDB accession no. 4RNP_C). (C) Phylogenetic tree and (D) Multiple sequences alignment based on DNA sequences of COVID-19 RdRp (GenBank accession no. <t>MT042778.1),</t> SARS RdRp (GenBank accession no. AY340092.1), influenza A PB1 (GenBank accession no. AJ620348.2) and hepatitis C virus NS5B (GenBank accession no. AJ608785.1), calcivirus RdRp (GenBank accession no. Y13703.1) and T7 Phage RdRp (GenBank accession no. M3830s28.1). RdRp, RNA-dependent RNA polymerase; COVID-19, coronavirus disease 2019; SARS, severe acute respiratory syndrome.
Genbank Accession No. Mt042778.1, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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codon-optimized sequence for mers s (emc strain)  (GenScript corporation)
90
GenScript corporation codon-optimized sequence for mers s (emc strain)
Phylogenetic trees and multiple sequence alignments of COVID-19 RdRp. (A) Phylogenetic tree using ClustalW software and (B) multiple sequence alignment using CLUSTAL 2.1 based on amino acid sequences of COVID-19 nsp 12 <t>(GenBank</t> accession no. YP_009725307.1), SARS rep (UniProtKB accession no. R1AB_CVHSA), influenza A PB1 (GenBank accession no. AAK18013.1) and T7 Bacteriophage (T7 Phage) PHA (PDB accession no. 4RNP_C). (C) Phylogenetic tree and (D) Multiple sequences alignment based on DNA sequences of COVID-19 RdRp (GenBank accession no. <t>MT042778.1),</t> SARS RdRp (GenBank accession no. AY340092.1), influenza A PB1 (GenBank accession no. AJ620348.2) and hepatitis C virus NS5B (GenBank accession no. AJ608785.1), calcivirus RdRp (GenBank accession no. Y13703.1) and T7 Phage RdRp (GenBank accession no. M3830s28.1). RdRp, RNA-dependent RNA polymerase; COVID-19, coronavirus disease 2019; SARS, severe acute respiratory syndrome.
Codon Optimized Sequence For Mers S (Emc Strain), supplied by GenScript corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Phylogenetic trees and multiple sequence alignments of COVID-19 RdRp. (A) Phylogenetic tree using ClustalW software and (B) multiple sequence alignment using CLUSTAL 2.1 based on amino acid sequences of COVID-19 nsp 12 (GenBank accession no. YP_009725307.1), SARS rep (UniProtKB accession no. R1AB_CVHSA), influenza A PB1 (GenBank accession no. AAK18013.1) and T7 Bacteriophage (T7 Phage) PHA (PDB accession no. 4RNP_C). (C) Phylogenetic tree and (D) Multiple sequences alignment based on DNA sequences of COVID-19 RdRp (GenBank accession no. MT042778.1), SARS RdRp (GenBank accession no. AY340092.1), influenza A PB1 (GenBank accession no. AJ620348.2) and hepatitis C virus NS5B (GenBank accession no. AJ608785.1), calcivirus RdRp (GenBank accession no. Y13703.1) and T7 Phage RdRp (GenBank accession no. M3830s28.1). RdRp, RNA-dependent RNA polymerase; COVID-19, coronavirus disease 2019; SARS, severe acute respiratory syndrome.

Journal: International Journal of Molecular Medicine

Article Title: Zinc and SARS-CoV-2: A molecular modeling study of Zn interactions with RNA-dependent RNA-polymerase and 3C-like proteinase enzymes

doi: 10.3892/ijmm.2020.4790

Figure Lengend Snippet: Phylogenetic trees and multiple sequence alignments of COVID-19 RdRp. (A) Phylogenetic tree using ClustalW software and (B) multiple sequence alignment using CLUSTAL 2.1 based on amino acid sequences of COVID-19 nsp 12 (GenBank accession no. YP_009725307.1), SARS rep (UniProtKB accession no. R1AB_CVHSA), influenza A PB1 (GenBank accession no. AAK18013.1) and T7 Bacteriophage (T7 Phage) PHA (PDB accession no. 4RNP_C). (C) Phylogenetic tree and (D) Multiple sequences alignment based on DNA sequences of COVID-19 RdRp (GenBank accession no. MT042778.1), SARS RdRp (GenBank accession no. AY340092.1), influenza A PB1 (GenBank accession no. AJ620348.2) and hepatitis C virus NS5B (GenBank accession no. AJ608785.1), calcivirus RdRp (GenBank accession no. Y13703.1) and T7 Phage RdRp (GenBank accession no. M3830s28.1). RdRp, RNA-dependent RNA polymerase; COVID-19, coronavirus disease 2019; SARS, severe acute respiratory syndrome.

Article Snippet: The nucleotide sequence of RdRp for COVID-19 (GenBank accession no. MT042778.1), SARS RdRp (GenBank accession no. AY340092.1), influenza A PB1 (GenBank accession no. AJ620348.2), hepatitis C virus (HCV) NS5B (GenBank accession no. AJ608785.1), calcivirus RdRp (GenBank accession no. Y13703.1) and T7 Phage RdRp (GenBank accession no. M3830s28.1) was retrieved in FASTA format from the National Center for Biotechnology Information (NCBI; http://www.ncbi.nlm.nih.gov ).

Techniques: Sequencing, Software, Virus

Phylogenetic trees and multiple sequence alignments of COVID-19 3CL pro . (A) Phylogenetic tree using ClustalW software and (B) multiple sequence alignment using CLUSTAL 2.1 based on amino acid sequences of COVID-19 nsp5A_3CLpro and nsp5B_3CLpro (NCBI Reference Sequence acces-sion no. YP_009742612.1), SARS peptidase_C30 (PDB accession no. 3F9G_A), YHV peptidase_C62 (GenBank accession no. ABL96309.1), BQV 3C-like protease (GenBank accession no. AIW60925.1) and European brown hare syndrome virus 3CL pro (NCBI Reference Sequence accession no. NP_786901.1). (C) Phylogenetic tree and (D) multiple sequence alignment based on DNA sequences of COVID-19 orf1ab (GenBank accession no. MT049951.1), SARS 3CL pro (GenBank accession no. AY609081.1), BQV 3CL pro (GenBank accession no. KM232906.1), YHV 3CL pro (GenBank accession no. EU977577.1) and avian infectious bronchitis virus 3CL pro (GenBank accession no. Q157446.1). YHV, yellow head virus; BQV, black queen cell virus; 3CL pro ; 3C-like protease; COVID-19, coronavirus disease 2019; SARS, severe acute respiratory syndrome.

Journal: International Journal of Molecular Medicine

Article Title: Zinc and SARS-CoV-2: A molecular modeling study of Zn interactions with RNA-dependent RNA-polymerase and 3C-like proteinase enzymes

doi: 10.3892/ijmm.2020.4790

Figure Lengend Snippet: Phylogenetic trees and multiple sequence alignments of COVID-19 3CL pro . (A) Phylogenetic tree using ClustalW software and (B) multiple sequence alignment using CLUSTAL 2.1 based on amino acid sequences of COVID-19 nsp5A_3CLpro and nsp5B_3CLpro (NCBI Reference Sequence acces-sion no. YP_009742612.1), SARS peptidase_C30 (PDB accession no. 3F9G_A), YHV peptidase_C62 (GenBank accession no. ABL96309.1), BQV 3C-like protease (GenBank accession no. AIW60925.1) and European brown hare syndrome virus 3CL pro (NCBI Reference Sequence accession no. NP_786901.1). (C) Phylogenetic tree and (D) multiple sequence alignment based on DNA sequences of COVID-19 orf1ab (GenBank accession no. MT049951.1), SARS 3CL pro (GenBank accession no. AY609081.1), BQV 3CL pro (GenBank accession no. KM232906.1), YHV 3CL pro (GenBank accession no. EU977577.1) and avian infectious bronchitis virus 3CL pro (GenBank accession no. Q157446.1). YHV, yellow head virus; BQV, black queen cell virus; 3CL pro ; 3C-like protease; COVID-19, coronavirus disease 2019; SARS, severe acute respiratory syndrome.

Article Snippet: The nucleotide sequence of RdRp for COVID-19 (GenBank accession no. MT042778.1), SARS RdRp (GenBank accession no. AY340092.1), influenza A PB1 (GenBank accession no. AJ620348.2), hepatitis C virus (HCV) NS5B (GenBank accession no. AJ608785.1), calcivirus RdRp (GenBank accession no. Y13703.1) and T7 Phage RdRp (GenBank accession no. M3830s28.1) was retrieved in FASTA format from the National Center for Biotechnology Information (NCBI; http://www.ncbi.nlm.nih.gov ).

Techniques: Sequencing, Software, Virus