cloudreg Search Results


cloudreg  (Neurodata GmbH)
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Neurodata GmbH cloudreg
a, Overview of the pipeline. b, Example outputs. Each row demonstrates registration of brain imaging data of various species to the corresponding atlas using <t>CloudReg.</t> The data from the autofluorescence channel is used for samples imaged with a light-sheet microscope (LSM). ARA CCFv3, Allen Reference Atlas Common Coordinate Frame version 3; CLARITY, clear lipid-exchanged anatomically rigid imaging/immunostaining-compatible tissue hydrogel; COLM, CLARITY-optimized light-sheet microscopy; GB, gigabyte; iDISCO, immunolabeling-enabled three-dimensional imaging of solvent-cleared organs; MB, megabyte; microCT, micro-computed tomography; TB, terabyte.
Cloudreg, supplied by Neurodata GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/cloudreg/pmc08494106-69-7-9?v=Neurodata+GmbH
Average 90 stars, based on 1 article reviews
cloudreg - by Bioz Stars, 2026-07
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a, Overview of the pipeline. b, Example outputs. Each row demonstrates registration of brain imaging data of various species to the corresponding atlas using CloudReg. The data from the autofluorescence channel is used for samples imaged with a light-sheet microscope (LSM). ARA CCFv3, Allen Reference Atlas Common Coordinate Frame version 3; CLARITY, clear lipid-exchanged anatomically rigid imaging/immunostaining-compatible tissue hydrogel; COLM, CLARITY-optimized light-sheet microscopy; GB, gigabyte; iDISCO, immunolabeling-enabled three-dimensional imaging of solvent-cleared organs; MB, megabyte; microCT, micro-computed tomography; TB, terabyte.

Journal: Nature methods

Article Title: CloudReg: automatic terabyte-scale cross-modal brain volume registration

doi: 10.1038/s41592-021-01218-z

Figure Lengend Snippet: a, Overview of the pipeline. b, Example outputs. Each row demonstrates registration of brain imaging data of various species to the corresponding atlas using CloudReg. The data from the autofluorescence channel is used for samples imaged with a light-sheet microscope (LSM). ARA CCFv3, Allen Reference Atlas Common Coordinate Frame version 3; CLARITY, clear lipid-exchanged anatomically rigid imaging/immunostaining-compatible tissue hydrogel; COLM, CLARITY-optimized light-sheet microscopy; GB, gigabyte; iDISCO, immunolabeling-enabled three-dimensional imaging of solvent-cleared organs; MB, megabyte; microCT, micro-computed tomography; TB, terabyte.

Article Snippet: Extensive documentation is available for deployment of CloudReg ( https://cloudreg.neurodata.io ) 11 .

Techniques: Imaging, Microscopy, Immunostaining, Immunolabeling, Solvent, Micro-CT