bootscan Search Results


similarity plot analysis version3.5.1  (Johns Hopkins HealthCare)
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Johns Hopkins HealthCare similarity plot analysis version3.5.1
Similarity Plot Analysis Version3.5.1, supplied by Johns Hopkins HealthCare, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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bootscan method version 3.5.1  (Johns Hopkins HealthCare)
90
Johns Hopkins HealthCare bootscan method version 3.5.1
Similarity plot and <t>bootscan</t> analysis of representative CV-A4 strains of HFMD circulating in China with the EV-A prototype strains. A sliding window of 500 nucleotides moving in 20 nucleotide increments was used in this analysis. ( A ) Mild case of C2, 11–60-CQ-CHN-2011. ( B ) Severe case of C2, 16–5-HuN-CHN-2016. ( C ) C5, 14–41-JX-CHN-2014. ( D ) C5, 16–128-JX-CHN-2016.
Bootscan Method Version 3.5.1, supplied by Johns Hopkins HealthCare, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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bootscan analysis  (Simplot Science)
86
Simplot Science bootscan analysis
Genomic recombination analysis of HCoV-OC43 and HCoV-HKU1. ( A ) <t>Bootscan</t> analysis of HCoV-OC43 genomes comparing recombination patterns between genotype K, lineage 1, and lineage 2. Reference genomes from genotypes A–J were used as putative parental strains. ( B ) Bootscan analysis of HCoV-HKU1 complete genome was performed using reference genomes for genotypes A, B and C as putative parental genotype. Co-infection status (CO: co-infected; N: non-coinfected).
Bootscan Analysis, supplied by Simplot Science, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/bootscan analysis/product/Simplot Science
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bootscan analysis - by Bioz Stars, 2026-06
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bootscan software  (Johns Hopkins HealthCare)
90
Johns Hopkins HealthCare bootscan software
Genomic recombination analysis of HCoV-OC43 and HCoV-HKU1. ( A ) <t>Bootscan</t> analysis of HCoV-OC43 genomes comparing recombination patterns between genotype K, lineage 1, and lineage 2. Reference genomes from genotypes A–J were used as putative parental strains. ( B ) Bootscan analysis of HCoV-HKU1 complete genome was performed using reference genomes for genotypes A, B and C as putative parental genotype. Co-infection status (CO: co-infected; N: non-coinfected).
Bootscan Software, supplied by Johns Hopkins HealthCare, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/bootscan software/product/Johns Hopkins HealthCare
Average 90 stars, based on 1 article reviews
bootscan software - by Bioz Stars, 2026-06
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rdp, geneconv, bootscan, and maximum chi square analyses  (CH Instruments)
90
CH Instruments rdp, geneconv, bootscan, and maximum chi square analyses
Genomic recombination analysis of HCoV-OC43 and HCoV-HKU1. ( A ) <t>Bootscan</t> analysis of HCoV-OC43 genomes comparing recombination patterns between genotype K, lineage 1, and lineage 2. Reference genomes from genotypes A–J were used as putative parental strains. ( B ) Bootscan analysis of HCoV-HKU1 complete genome was performed using reference genomes for genotypes A, B and C as putative parental genotype. Co-infection status (CO: co-infected; N: non-coinfected).
Rdp, Geneconv, Bootscan, And Maximum Chi Square Analyses, supplied by CH Instruments, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/rdp, geneconv, bootscan, and maximum chi square analyses/product/CH Instruments
Average 90 stars, based on 1 article reviews
rdp, geneconv, bootscan, and maximum chi square analyses - by Bioz Stars, 2026-06
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bootscan  (CH Instruments)
90
CH Instruments bootscan
Genomic recombination analysis of HCoV-OC43 and HCoV-HKU1. ( A ) <t>Bootscan</t> analysis of HCoV-OC43 genomes comparing recombination patterns between genotype K, lineage 1, and lineage 2. Reference genomes from genotypes A–J were used as putative parental strains. ( B ) Bootscan analysis of HCoV-HKU1 complete genome was performed using reference genomes for genotypes A, B and C as putative parental genotype. Co-infection status (CO: co-infected; N: non-coinfected).
Bootscan, supplied by CH Instruments, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/bootscan/product/CH Instruments
Average 90 stars, based on 1 article reviews
bootscan - by Bioz Stars, 2026-06
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bootscanning  (CH Instruments)
90
CH Instruments bootscanning
Genomic recombination analysis of HCoV-OC43 and HCoV-HKU1. ( A ) <t>Bootscan</t> analysis of HCoV-OC43 genomes comparing recombination patterns between genotype K, lineage 1, and lineage 2. Reference genomes from genotypes A–J were used as putative parental strains. ( B ) Bootscan analysis of HCoV-HKU1 complete genome was performed using reference genomes for genotypes A, B and C as putative parental genotype. Co-infection status (CO: co-infected; N: non-coinfected).
Bootscanning, supplied by CH Instruments, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/bootscanning/product/CH Instruments
Average 90 stars, based on 1 article reviews
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simplot bootscan  (Simplot Science)
86
Simplot Science simplot bootscan
Genomic recombination analysis of HCoV-OC43 and HCoV-HKU1. ( A ) <t>Bootscan</t> analysis of HCoV-OC43 genomes comparing recombination patterns between genotype K, lineage 1, and lineage 2. Reference genomes from genotypes A–J were used as putative parental strains. ( B ) Bootscan analysis of HCoV-HKU1 complete genome was performed using reference genomes for genotypes A, B and C as putative parental genotype. Co-infection status (CO: co-infected; N: non-coinfected).
Simplot Bootscan, supplied by Simplot Science, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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bootscanning analyses  (Simplot Science)
86
Simplot Science bootscanning analyses
Genomic recombination analysis of HCoV-OC43 and HCoV-HKU1. ( A ) <t>Bootscan</t> analysis of HCoV-OC43 genomes comparing recombination patterns between genotype K, lineage 1, and lineage 2. Reference genomes from genotypes A–J were used as putative parental strains. ( B ) Bootscan analysis of HCoV-HKU1 complete genome was performed using reference genomes for genotypes A, B and C as putative parental genotype. Co-infection status (CO: co-infected; N: non-coinfected).
Bootscanning Analyses, supplied by Simplot Science, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/bootscanning analyses/product/Simplot Science
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bootscan analyses  (Simplot Science)
86
Simplot Science bootscan analyses
Similarity plot and <t>bootscan</t> analyses of the CVA4 strains in this study with the reference strains. Similarity plot and bootscan profiles were indistinguishable among isolates YT13, LY10, LY25, LY32 and LY36; therefore, only the representative plots for LY10 are shown.
Bootscan Analyses, supplied by Simplot Science, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/bootscan analyses/product/Simplot Science
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bootscan analyses - by Bioz Stars, 2026-06
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bootscanning approach  (Simplot Science)
86
Simplot Science bootscanning approach
Similarity plot and <t>bootscan</t> analyses of the CVA4 strains in this study with the reference strains. Similarity plot and bootscan profiles were indistinguishable among isolates YT13, LY10, LY25, LY32 and LY36; therefore, only the representative plots for LY10 are shown.
Bootscanning Approach, supplied by Simplot Science, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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bootscanning  (Simplot Science)
86
Simplot Science bootscanning
Similarity plot and <t>bootscan</t> analyses of the CVA4 strains in this study with the reference strains. Similarity plot and bootscan profiles were indistinguishable among isolates YT13, LY10, LY25, LY32 and LY36; therefore, only the representative plots for LY10 are shown.
Bootscanning, supplied by Simplot Science, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/bootscanning/product/Simplot Science
Average 86 stars, based on 1 article reviews
bootscanning - by Bioz Stars, 2026-06
86/100 stars
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Image Search Results


Similarity plot and bootscan analysis of representative CV-A4 strains of HFMD circulating in China with the EV-A prototype strains. A sliding window of 500 nucleotides moving in 20 nucleotide increments was used in this analysis. ( A ) Mild case of C2, 11–60-CQ-CHN-2011. ( B ) Severe case of C2, 16–5-HuN-CHN-2016. ( C ) C5, 14–41-JX-CHN-2014. ( D ) C5, 16–128-JX-CHN-2016.

Journal: Scientific Reports

Article Title: Emerging recombination of the C2 sub-genotype of HFMD-associated CV-A4 is persistently and extensively circulating in China

doi: 10.1038/s41598-019-49859-7

Figure Lengend Snippet: Similarity plot and bootscan analysis of representative CV-A4 strains of HFMD circulating in China with the EV-A prototype strains. A sliding window of 500 nucleotides moving in 20 nucleotide increments was used in this analysis. ( A ) Mild case of C2, 11–60-CQ-CHN-2011. ( B ) Severe case of C2, 16–5-HuN-CHN-2016. ( C ) C5, 14–41-JX-CHN-2014. ( D ) C5, 16–128-JX-CHN-2016.

Article Snippet: Potential recombination between CV-A4 and other HEV-A strains was determined with similarity plots and the bootscan method (version 3.5.1; Stuart Ray, Johns Hopkins University, Baltimore, Maryland, USA) .

Techniques:

Genomic recombination analysis of HCoV-OC43 and HCoV-HKU1. ( A ) Bootscan analysis of HCoV-OC43 genomes comparing recombination patterns between genotype K, lineage 1, and lineage 2. Reference genomes from genotypes A–J were used as putative parental strains. ( B ) Bootscan analysis of HCoV-HKU1 complete genome was performed using reference genomes for genotypes A, B and C as putative parental genotype. Co-infection status (CO: co-infected; N: non-coinfected).

Journal: Viruses

Article Title: Neutral Impact of SARS-CoV-2 Coinfection on the Recombination-Driven Evolution of Endemic HCoV-OC43

doi: 10.3390/v17091263

Figure Lengend Snippet: Genomic recombination analysis of HCoV-OC43 and HCoV-HKU1. ( A ) Bootscan analysis of HCoV-OC43 genomes comparing recombination patterns between genotype K, lineage 1, and lineage 2. Reference genomes from genotypes A–J were used as putative parental strains. ( B ) Bootscan analysis of HCoV-HKU1 complete genome was performed using reference genomes for genotypes A, B and C as putative parental genotype. Co-infection status (CO: co-infected; N: non-coinfected).

Article Snippet: Recombination was assessed via Bootscan analysis (SimPlot).

Techniques: Infection

Similarity plot and bootscan analyses of the CVA4 strains in this study with the reference strains. Similarity plot and bootscan profiles were indistinguishable among isolates YT13, LY10, LY25, LY32 and LY36; therefore, only the representative plots for LY10 are shown.

Journal: Scientific Reports

Article Title: Whole-genome analysis of CVA4 in children with herpangina in two cities of Shandong, China

doi: 10.1038/s41598-026-39455-x

Figure Lengend Snippet: Similarity plot and bootscan analyses of the CVA4 strains in this study with the reference strains. Similarity plot and bootscan profiles were indistinguishable among isolates YT13, LY10, LY25, LY32 and LY36; therefore, only the representative plots for LY10 are shown.

Article Snippet: To validate these events and precisely map the recombination breakpoints, similarity plot and bootscan analyses were subsequently performed using Simplot (v3.5.1) (Fig. ).

Techniques: