Journal: Scientific Reports

Article Title: Viral driven epigenetic events alter the expression of cancer-related genes in Epstein-Barr-virus naturally infected Burkitt lymphoma cell lines

doi: 10.1038/s41598-017-05713-2

Figure Lengend Snippet: Differentially methylated positions (DMPs). Top 100 most significant DMPs are shown (FDR < 0.05, delta-beta >40%).

Article Snippet: cg04611493 , 0.00022 , 26392 , LONRF2 , LONRF2.

Techniques: Methylation

Journal: Future science OA

Article Title: Adverse predictive value of ASPM on lung adenocarcinoma overall survival depended on chemotherapy status.

doi: 10.1080/20565623.2025.2489328

Figure Lengend Snippet: Figure 1. (A) TCGA TARGET GTEx pan-cancer dataset analysis showed the relationship between ASPM gene expression and patient prognosis in each tumor. (B) In TCGA dataset of LUAD, high ASPM expression was related to worse overall survival (Log-rank test p = 2.4e-6). (C) In proteomics dataset of LUAD, the difference of prognosis was not significant between ASPM high or low expression groups (Log-rank test p = 0.26).

Article Snippet: Immunohistochemistry and special staining the Luad tissues (n = 160) were obtained from surgically resected specimens and made into tissue microarray. the sections were de-paraffinized and hydrated, and the endogenous peroxidase was blocked. antigen retrieval was performed using the dako target Retrieval Solution, High pH (dako ominis, agilent technologies, Santa Clara, Ca, uSa), in a ptLink set at 98 °C for 25 min. the tissue sections were incubated with an anti-aSpm rabbit polyclonal antibody (1:200, a02584-1, Boster, China) 1h at 37 °C. detection of immunostaining was achieved by an enzyme-conjugated polymer complex (K8002, dako, denmark) adapted for autostainers from daKo (dako autostainer, agilent technologies). the staining intensity in selected areas was scored as follows: 0, no staining; 1, weak staining; 2, moderate staining; 3, strong staining. the stained area was scored as follows: 0, no staining; 1, 1–10% positive cells; 2, 10–50% positive cells; 3, > 50% positive cells. the final score was evaluated by multiplying the staining intensity and stained area percentage. the negative and weak staining cases were considered as low expression group while the moderate and strong staining cases were defined as high expression group in later analysis.

Techniques: Gene Expression, Expressing

Journal: Future science OA

Article Title: Adverse predictive value of ASPM on lung adenocarcinoma overall survival depended on chemotherapy status.

doi: 10.1080/20565623.2025.2489328

Figure Lengend Snippet: Figure 2. (A) The representative immunohistochemical staining of ASPM negative, weak, moderate, and strong cases. (B) In our cohort, high ASPM expression predicted better LUAD prognosis (Log-rank test p = 5.4e-4). (C) In patients who received chemotherapy, high ASPM expression was related to better overall survival (Log-rank test p = 5.0e-4). (D) In patients who did not received chemotherapy, ASPM expression was not related to patient overall survival (Log-rank test p = 0.48). (E) Multivariate regression analysis showed ASPM was not an independent prognostic factor while other protective factor included chemother apy and risk factor included clinical stages. (F) time dependent ROC analysis was conducted at time points 365, 1095, and 1825 days. The AUC and confidence intervals were evaluated using the ci function of pROC.

Article Snippet: Immunohistochemistry and special staining the Luad tissues (n = 160) were obtained from surgically resected specimens and made into tissue microarray. the sections were de-paraffinized and hydrated, and the endogenous peroxidase was blocked. antigen retrieval was performed using the dako target Retrieval Solution, High pH (dako ominis, agilent technologies, Santa Clara, Ca, uSa), in a ptLink set at 98 °C for 25 min. the tissue sections were incubated with an anti-aSpm rabbit polyclonal antibody (1:200, a02584-1, Boster, China) 1h at 37 °C. detection of immunostaining was achieved by an enzyme-conjugated polymer complex (K8002, dako, denmark) adapted for autostainers from daKo (dako autostainer, agilent technologies). the staining intensity in selected areas was scored as follows: 0, no staining; 1, weak staining; 2, moderate staining; 3, strong staining. the stained area was scored as follows: 0, no staining; 1, 1–10% positive cells; 2, 10–50% positive cells; 3, > 50% positive cells. the final score was evaluated by multiplying the staining intensity and stained area percentage. the negative and weak staining cases were considered as low expression group while the moderate and strong staining cases were defined as high expression group in later analysis.

Techniques: Immunohistochemical staining, Staining, Expressing

Journal: Future science OA

Article Title: Adverse predictive value of ASPM on lung adenocarcinoma overall survival depended on chemotherapy status.

doi: 10.1080/20565623.2025.2489328

Figure Lengend Snippet: Figure 3. (A) heatmap of signature proteins in ASPM low or high groups from proteomics dataset. (B) High ASPM1 related signature proteins were enriched mainly in cell cycle and mitosis processes by Metascape analysis. (C) ASPM positive group in proteomics dataset showed higher expression of proliferation related proteins mainly including AURKB, PLK1, KIFC3, EZH2,CDKN2A, BRD3, CASP2, MKI67, CDK1, and MDC1.

Article Snippet: Immunohistochemistry and special staining the Luad tissues (n = 160) were obtained from surgically resected specimens and made into tissue microarray. the sections were de-paraffinized and hydrated, and the endogenous peroxidase was blocked. antigen retrieval was performed using the dako target Retrieval Solution, High pH (dako ominis, agilent technologies, Santa Clara, Ca, uSa), in a ptLink set at 98 °C for 25 min. the tissue sections were incubated with an anti-aSpm rabbit polyclonal antibody (1:200, a02584-1, Boster, China) 1h at 37 °C. detection of immunostaining was achieved by an enzyme-conjugated polymer complex (K8002, dako, denmark) adapted for autostainers from daKo (dako autostainer, agilent technologies). the staining intensity in selected areas was scored as follows: 0, no staining; 1, weak staining; 2, moderate staining; 3, strong staining. the stained area was scored as follows: 0, no staining; 1, 1–10% positive cells; 2, 10–50% positive cells; 3, > 50% positive cells. the final score was evaluated by multiplying the staining intensity and stained area percentage. the negative and weak staining cases were considered as low expression group while the moderate and strong staining cases were defined as high expression group in later analysis.

Techniques: Expressing

Journal: Future science OA

Article Title: Adverse predictive value of ASPM on lung adenocarcinoma overall survival depended on chemotherapy status.

doi: 10.1080/20565623.2025.2489328

Figure Lengend Snippet: Figure 4. (A) Proteomics data analysis showed ASPM positive group had higher MKI67 expression. (B) Western blot analysis of A549 cells and H1299 cells confirmed effectiveness of ASPM transfection and in vitro overexpression. (C-D) Statistical anal ysis of western blot images. (E-F) CCK8 assay proved overexpression of ASPM promoted tumor cell proliferation in A549 and H1299 cells. (G-H) When treated with cisplatin, overexpression of ASPM enhanced the lethality on A549 and H1299 tumor cells. (P value *<0.05, **<0.01, ***<0.001).

Article Snippet: Immunohistochemistry and special staining the Luad tissues (n = 160) were obtained from surgically resected specimens and made into tissue microarray. the sections were de-paraffinized and hydrated, and the endogenous peroxidase was blocked. antigen retrieval was performed using the dako target Retrieval Solution, High pH (dako ominis, agilent technologies, Santa Clara, Ca, uSa), in a ptLink set at 98 °C for 25 min. the tissue sections were incubated with an anti-aSpm rabbit polyclonal antibody (1:200, a02584-1, Boster, China) 1h at 37 °C. detection of immunostaining was achieved by an enzyme-conjugated polymer complex (K8002, dako, denmark) adapted for autostainers from daKo (dako autostainer, agilent technologies). the staining intensity in selected areas was scored as follows: 0, no staining; 1, weak staining; 2, moderate staining; 3, strong staining. the stained area was scored as follows: 0, no staining; 1, 1–10% positive cells; 2, 10–50% positive cells; 3, > 50% positive cells. the final score was evaluated by multiplying the staining intensity and stained area percentage. the negative and weak staining cases were considered as low expression group while the moderate and strong staining cases were defined as high expression group in later analysis.

Techniques: Expressing, Western Blot, Transfection, In Vitro, Over Expression, CCK-8 Assay

Journal: Cancer Cell International

Article Title: Characterization of G2/M checkpoint classifier for personalized treatment in uterine corpus endometrial carcinoma

doi: 10.1186/s12935-025-03667-4

Figure Lengend Snippet: Validation of real-world cohort based on the classifier. A The expression levels of CDC7, ASPM, CENPE, KIF23 and DEPDC1B on qRT-PCR results. B By inputting the mRNA levels of the 5 model genes into the classifier, the real-world UCEC cohort was identified as two G2MC subtypes. Representative immunohistochemistry images of CDC7, ASPM, CENPE, KIF23, and DEPDC1B in the two G2MC subtypes, magnification 40x. C K-M survival analysis of two G2MC subtypes based on optimal cutoff value grouping. The ending events are PFS. D The proportion of progression after treatment in the two groups of G2MC subtypes. E Comparing the proportion of patients with pathological grades G1 to G3 in the two G2MC subtypes in the real-world cohort. *p < 0.05, **p < 0.01, ***p < 0.001, ****p < 0.0001

Article Snippet: Subsequently, the sections were first incubated with primary antibodies CDC7 (1:200, CUSABIO, China), ASPM (1:200, CUSABIO, China), CENPE (1:500, Sanying, China), KIF23 (1:200, CUSABIO, China), and DEPDC1B (1:200, CUSABIO, China) at 4 °C overnight, and then incubated with multimerized anti-rabbit IgG-HRP secondary antibodies at room temperature for 90 min.

Techniques: Biomarker Discovery, Expressing, Quantitative RT-PCR, Immunohistochemistry

Journal: Evidence-based Complementary and Alternative Medicine : eCAM

Article Title: Antiangiogenic Effects and Therapeutic Targets of Azadirachta indica Leaf Extract in Endothelial Cells

doi: 10.1155/2012/303019

Figure Lengend Snippet: (b)

Article Snippet: ASPM , 2.36 ± 0.63 , 5.69 ± 2.34 , Hs00996458_m1 , Calmodulin binding.

Techniques: Binding Assay, Protein Binding, Activity Assay, Ubiquitin Proteomics