806r Search Results


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  • 92
    Millipore primer 806 r
    Primer 806 R, supplied by Millipore, used in various techniques. Bioz Stars score: 92/100, based on 6 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/primer 806 r/product/Millipore
    Average 92 stars, based on 6 article reviews
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    primer 806 r - by Bioz Stars, 2020-08
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    91
    Illumina Inc 806 r reverse primer
    806 R Reverse Primer, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 58 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/806 r reverse primer/product/Illumina Inc
    Average 91 stars, based on 58 article reviews
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    806 r reverse primer - by Bioz Stars, 2020-08
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    91
    Millipore 806r
    806r, supplied by Millipore, used in various techniques. Bioz Stars score: 91/100, based on 20 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/806r/product/Millipore
    Average 91 stars, based on 20 article reviews
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    806r - by Bioz Stars, 2020-08
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    93
    Illumina Inc 806r
    Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and <t>806R,</t> which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift
    806r, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 1074 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/806r/product/Illumina Inc
    Average 93 stars, based on 1074 article reviews
    Price from $9.99 to $1999.99
    806r - by Bioz Stars, 2020-08
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    93
    Sangon Biotech 806r
    Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and <t>806R,</t> which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift
    806r, supplied by Sangon Biotech, used in various techniques. Bioz Stars score: 93/100, based on 16 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/806r/product/Sangon Biotech
    Average 93 stars, based on 16 article reviews
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    806r - by Bioz Stars, 2020-08
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    91
    Thermo Fisher 806r
    Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and <t>806R,</t> which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift
    806r, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 91/100, based on 132 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/806r/product/Thermo Fisher
    Average 91 stars, based on 132 article reviews
    Price from $9.99 to $1999.99
    806r - by Bioz Stars, 2020-08
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    93
    Sangon Biotech 806r ggactachvgggtwtctaat
    Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and <t>806R,</t> which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift
    806r Ggactachvgggtwtctaat, supplied by Sangon Biotech, used in various techniques. Bioz Stars score: 93/100, based on 6 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/806r ggactachvgggtwtctaat/product/Sangon Biotech
    Average 93 stars, based on 6 article reviews
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    806r ggactachvgggtwtctaat - by Bioz Stars, 2020-08
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    91
    Thermo Fisher 806r ggactachvgggtwtctaat
    Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and <t>806R,</t> which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift
    806r Ggactachvgggtwtctaat, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 91/100, based on 18 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/806r ggactachvgggtwtctaat/product/Thermo Fisher
    Average 91 stars, based on 18 article reviews
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    806r ggactachvgggtwtctaat - by Bioz Stars, 2020-08
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    90
    Eurofins 806r
    Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and <t>806R,</t> which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift
    806r, supplied by Eurofins, used in various techniques. Bioz Stars score: 90/100, based on 18 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/806r/product/Eurofins
    Average 90 stars, based on 18 article reviews
    Price from $9.99 to $1999.99
    806r - by Bioz Stars, 2020-08
    90/100 stars
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    806r  (TaKaRa)
    92
    TaKaRa 806r
    Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and <t>806R,</t> which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift
    806r, supplied by TaKaRa, used in various techniques. Bioz Stars score: 92/100, based on 51 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/806r/product/TaKaRa
    Average 92 stars, based on 51 article reviews
    Price from $9.99 to $1999.99
    806r - by Bioz Stars, 2020-08
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    92
    Integrated DNA Technologies 806r
    Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and <t>806R,</t> which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift
    806r, supplied by Integrated DNA Technologies, used in various techniques. Bioz Stars score: 92/100, based on 21 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/806r/product/Integrated DNA Technologies
    Average 92 stars, based on 21 article reviews
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    806r - by Bioz Stars, 2020-08
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    92
    5 PRIME 806r
    Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and <t>806R,</t> which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift
    806r, supplied by 5 PRIME, used in various techniques. Bioz Stars score: 92/100, based on 7 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/806r/product/5 PRIME
    Average 92 stars, based on 7 article reviews
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    806r - by Bioz Stars, 2020-08
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    91
    Fasmac Co Ltd 806r
    Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and <t>806R,</t> which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift
    806r, supplied by Fasmac Co Ltd, used in various techniques. Bioz Stars score: 91/100, based on 7 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/806r/product/Fasmac Co Ltd
    Average 91 stars, based on 7 article reviews
    Price from $9.99 to $1999.99
    806r - by Bioz Stars, 2020-08
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    91
    5 PRIME 341f 806r universal primers
    Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and <t>806R,</t> which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift
    341f 806r Universal Primers, supplied by 5 PRIME, used in various techniques. Bioz Stars score: 91/100, based on 4 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/341f 806r universal primers/product/5 PRIME
    Average 91 stars, based on 4 article reviews
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    341f 806r universal primers - by Bioz Stars, 2020-08
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    93
    fluidigm primer v4 806r new
    Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and <t>806R,</t> which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift
    Primer V4 806r New, supplied by fluidigm, used in various techniques. Bioz Stars score: 93/100, based on 9 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    89
    Illumina Inc 515f 806r
    Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and <t>806R,</t> which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift
    515f 806r, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 89/100, based on 88 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/515f 806r/product/Illumina Inc
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    515f 806r - by Bioz Stars, 2020-08
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    88
    Illumina Inc 806r ggactachvgggtwtctaat
    Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and <t>806R,</t> which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift
    806r Ggactachvgggtwtctaat, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 88/100, based on 49 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/806r ggactachvgggtwtctaat/product/Illumina Inc
    Average 88 stars, based on 49 article reviews
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    806r ggactachvgggtwtctaat - by Bioz Stars, 2020-08
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    93
    Millipore cs2 806r
    Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and <t>806R,</t> which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift
    Cs2 806r, supplied by Millipore, used in various techniques. Bioz Stars score: 93/100, based on 3 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    cs2 806r - by Bioz Stars, 2020-08
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    93
    Kaneka Corp primer 806r 5 ggactachvgggtwtctaat 3
    Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and <t>806R,</t> which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift
    Primer 806r 5 Ggactachvgggtwtctaat 3, supplied by Kaneka Corp, used in various techniques. Bioz Stars score: 93/100, based on 15 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/primer 806r 5 ggactachvgggtwtctaat 3/product/Kaneka Corp
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    92
    Illumina Inc 806r primers ggactacnvgggtwtctaat
    Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and <t>806R,</t> which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift
    806r Primers Ggactacnvgggtwtctaat, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 92/100, based on 8 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/806r primers ggactacnvgggtwtctaat/product/Illumina Inc
    Average 92 stars, based on 8 article reviews
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    806r primers ggactacnvgggtwtctaat - by Bioz Stars, 2020-08
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    Image Search Results


    Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and 806R, which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift

    Journal: BMC Microbiology

    Article Title: Phasing amplicon sequencing on Illumina Miseq for robust environmental microbial community analysis

    doi: 10.1186/s12866-015-0450-4

    Figure Lengend Snippet: Impact of phasing primers on base frequency distributions within the V4 region of the 16S rRNA gene. The V4 region is typically amplified with the primer set 515F and 806R, which generates an amplicon of 253 bp (excluding primers). Due to high sequence variation, reliable alignments are difficult to obtain for the entire region. Thus, the base frequencies for the first 100 bp from both directions were estimated based on all 16S gene sequences (96,489 for forward direction, 95,071 for reverse direction) from GreenGenes. Differences between the maximum and minimum base frequencies at each sequence position were estimated before and after primer shift for forward ( a ), and reverse sequences ( b ). Base frequencies of the first 12 positions of the forward sequences before ( c ) and after ( d ) primer shift, and the reverse sequences before ( e ) and after ( f ) primer shift

    Article Snippet: Base composition and fluorescence signal distribution The V4 region of the 16S rRNA gene (Fig. ; Additional file : Figure S3) is commonly targeted for sequencing with the primer set 515F and 806R, which has high sequence coverage for both bacteria and archaea [ , , ] and produces an appropriately sized amplicon (253 bp by excluding primers) for Illumina sequencing.

    Techniques: Amplification, Sequencing

    Two-step PCR scheme used in the PAS method for 16S rRNA gene amplicon sequencing. ( a ) First-step PCR using regular target gene primers: 515F and 806R to target the v4 region only; ( b ) Products from the first-step PCR, which do not have the up and down stream sequences of the original template DNA, thus avoiding extra PCR biases resulting from binding of the added components of the long phasing primers to the template DNA; ( c ) Second-step PCR using complementary phasing primers with spacers of 0–7 bases (generating primer sets of 8 primers, each with a total of 7 bases between the two spacers) in both forward and reverse primers, which provides the sequence position frame shift among samples; ( d ) Products from the second-step PCR showing the sequence position frame shift among samples

    Journal: BMC Microbiology

    Article Title: Phasing amplicon sequencing on Illumina Miseq for robust environmental microbial community analysis

    doi: 10.1186/s12866-015-0450-4

    Figure Lengend Snippet: Two-step PCR scheme used in the PAS method for 16S rRNA gene amplicon sequencing. ( a ) First-step PCR using regular target gene primers: 515F and 806R to target the v4 region only; ( b ) Products from the first-step PCR, which do not have the up and down stream sequences of the original template DNA, thus avoiding extra PCR biases resulting from binding of the added components of the long phasing primers to the template DNA; ( c ) Second-step PCR using complementary phasing primers with spacers of 0–7 bases (generating primer sets of 8 primers, each with a total of 7 bases between the two spacers) in both forward and reverse primers, which provides the sequence position frame shift among samples; ( d ) Products from the second-step PCR showing the sequence position frame shift among samples

    Article Snippet: Base composition and fluorescence signal distribution The V4 region of the 16S rRNA gene (Fig. ; Additional file : Figure S3) is commonly targeted for sequencing with the primer set 515F and 806R, which has high sequence coverage for both bacteria and archaea [ , , ] and produces an appropriately sized amplicon (253 bp by excluding primers) for Illumina sequencing.

    Techniques: Polymerase Chain Reaction, Amplification, Sequencing, Binding Assay