truseq custom amplicon low input  (Illumina Inc)

 
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    Name:
    TruSeq Custom Amplicon Filter Plate
    Description:
    The TruSight Myeloid Sequencing Panel uses expert defined content and proven next generation sequencing NGS technology to identify somatic variants in myeloid malignancies The panel content was designed by a consortium of recognized experts in blood cancer disorders and targets genes frequently mutated in Acute myeloid leukemia AML Myelodysplastic syndrome MDS Myeloproliferative neoplasms MPN Chronic myelogenous leukemia CML Chronic myelomonocytic leukemia CMML Juvenile myelomonocytic leukemia JMML The TruSight Myeloid Sequencing Panel covers 15 full genes exons only and 39 additional genes where oncogenic hotspots are covered providing a comprehensive assessment of the key genes known to be involved in myeloid malignancies in a single test The result is an accurate cost effective solution that enables researchers to profile liquid tumors View the gene list TruSight Myeloid libraries are ideally suited to run on a desktop sequencer and perform alignment and variant calling with the MiSeq Reporter or Local Run Manager Amplicon workflow with Somatic Variant Caller Filtering and annotation can then be performed using BaseSpace Variant Interpreter See All Illumina Cancer Research Panels
    Catalog Number:
    fc-130-1006
    Price:
    None
    Category:
    Clinical Research Products
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    Structured Review

    Illumina Inc truseq custom amplicon low input
    TruSeq Custom Amplicon Filter Plate
    The TruSight Myeloid Sequencing Panel uses expert defined content and proven next generation sequencing NGS technology to identify somatic variants in myeloid malignancies The panel content was designed by a consortium of recognized experts in blood cancer disorders and targets genes frequently mutated in Acute myeloid leukemia AML Myelodysplastic syndrome MDS Myeloproliferative neoplasms MPN Chronic myelogenous leukemia CML Chronic myelomonocytic leukemia CMML Juvenile myelomonocytic leukemia JMML The TruSight Myeloid Sequencing Panel covers 15 full genes exons only and 39 additional genes where oncogenic hotspots are covered providing a comprehensive assessment of the key genes known to be involved in myeloid malignancies in a single test The result is an accurate cost effective solution that enables researchers to profile liquid tumors View the gene list TruSight Myeloid libraries are ideally suited to run on a desktop sequencer and perform alignment and variant calling with the MiSeq Reporter or Local Run Manager Amplicon workflow with Somatic Variant Caller Filtering and annotation can then be performed using BaseSpace Variant Interpreter See All Illumina Cancer Research Panels
    https://www.bioz.com/result/truseq custom amplicon low input/product/Illumina Inc
    Average 99 stars, based on 2 article reviews
    Price from $9.99 to $1999.99
    truseq custom amplicon low input - by Bioz Stars, 2020-09
    99/100 stars

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    Related Articles

    Sequencing:

    Article Title: Biased estimates of clonal evolution and subclonal heterogeneity can arise from PCR duplicates in deep sequencing experiments
    Article Snippet: .. Exome sequencing studies at moderate (approximately 100X) depth rely on read position to identify potential PCR duplicates [ ], but amplicon-based (molecular inversion probes [ ], RainDrop Digital PCR (RainDance Technologies, Billerica, MA, USA), TruSeq Custom Amplicon (Illumina, San Diego, CA, USA)) methods commonly used for targeted sequencing have reads with the same start and stop positions. .. Hybridization-based methods, when sequenced deeply, can result in reads that are not PCR duplicates but have the same start stop locations by chance [ ].

    Article Title: Single-cell transcriptomic analysis of primary and metastatic tumor ecosystems in head and neck cancer
    Article Snippet: .. Growth of a pure population of fibroblasts was confirmed by a PCR-based targeted sequencing assay using the TruSeq Custom Amplicon platform (Illumina). ..

    Article Title: An Integrated Genomic Strategy Delineates Candidate Mediator Genes Regulating Grain Size and Weight in Rice
    Article Snippet: .. The targeted resequencing of coding and non-coding intronic and regulatory sequence components of 55 MED genes in 384 diverse low and high grain weight rice accessions (association panel) using the Illumina TruSeq Custom Amplicon strategy mined 3971 high-quality SNPs with an average frequency of 72.2 SNPs/gene ( , , ). ..

    Article Title: Prognostic signature and clonality pattern of recurrently mutated genes in inactive chronic lymphocytic leukemia
    Article Snippet: .. Targeted sequencing We designed a TruSeq Custom Amplicon panel (Illumina, Inc. San Diego, CA, USA) containing 13 genes and covering 28.099 bases ( ). .. For some genes known mutation hotspots were targeted; and for those with a widespread localization of the lesions, the entire coding sequence was analyzed.

    Article Title: Germline mutations in the alternative pathway of complement predispose to HELLP syndrome
    Article Snippet: .. A custom panel of 9 genes known to function in the APC was selected for sequencing using the Illumina TruSeq Custom Amplicon (v1.5). .. Illumina DesignStudio software was utilized to generate custom oligonucleotides designed to amplify exonic regions of the following selected genes: CFH , CFB , CFI , CFHR1 , CFHR3 , CFHR5 , C3 , CD46 ( MCP ), and THBD .

    Article Title: Elucidating the genetic architecture of Adams–Oliver syndrome in a large European cohort, et al. Elucidating the genetic architecture of Adams–Oliver syndrome in a large European cohort
    Article Snippet: .. The majority of the samples were sequenced by targeted next‐generation resequencing (n = 140) using either the HaloPlex Target Enrichment System (Agilent Technologies, Santa Clara, CA) as described previously (Meester et al., ), or a TruSeq Custom Amplicon Panel (Illumina, San Diego, CA) followed by sequencing on a MiSeq system (Illumina, San Diego, CA) with 150 bp paired‐end reads. .. Sequence data obtained from the TruSeq Custom Amplicon Panel were analyzed using Illumina's VariantStudio Data Analysis Software v3.0.

    Polymerase Chain Reaction:

    Article Title: Biased estimates of clonal evolution and subclonal heterogeneity can arise from PCR duplicates in deep sequencing experiments
    Article Snippet: .. Exome sequencing studies at moderate (approximately 100X) depth rely on read position to identify potential PCR duplicates [ ], but amplicon-based (molecular inversion probes [ ], RainDrop Digital PCR (RainDance Technologies, Billerica, MA, USA), TruSeq Custom Amplicon (Illumina, San Diego, CA, USA)) methods commonly used for targeted sequencing have reads with the same start and stop positions. .. Hybridization-based methods, when sequenced deeply, can result in reads that are not PCR duplicates but have the same start stop locations by chance [ ].

    Article Title: Single-cell transcriptomic analysis of primary and metastatic tumor ecosystems in head and neck cancer
    Article Snippet: .. Growth of a pure population of fibroblasts was confirmed by a PCR-based targeted sequencing assay using the TruSeq Custom Amplicon platform (Illumina). ..

    Amplification:

    Article Title: Biased estimates of clonal evolution and subclonal heterogeneity can arise from PCR duplicates in deep sequencing experiments
    Article Snippet: .. Exome sequencing studies at moderate (approximately 100X) depth rely on read position to identify potential PCR duplicates [ ], but amplicon-based (molecular inversion probes [ ], RainDrop Digital PCR (RainDance Technologies, Billerica, MA, USA), TruSeq Custom Amplicon (Illumina, San Diego, CA, USA)) methods commonly used for targeted sequencing have reads with the same start and stop positions. .. Hybridization-based methods, when sequenced deeply, can result in reads that are not PCR duplicates but have the same start stop locations by chance [ ].

    Article Title: Single-cell transcriptomic analysis of primary and metastatic tumor ecosystems in head and neck cancer
    Article Snippet: .. Growth of a pure population of fibroblasts was confirmed by a PCR-based targeted sequencing assay using the TruSeq Custom Amplicon platform (Illumina). ..

    Article Title: An Integrated Genomic Strategy Delineates Candidate Mediator Genes Regulating Grain Size and Weight in Rice
    Article Snippet: .. The targeted resequencing of coding and non-coding intronic and regulatory sequence components of 55 MED genes in 384 diverse low and high grain weight rice accessions (association panel) using the Illumina TruSeq Custom Amplicon strategy mined 3971 high-quality SNPs with an average frequency of 72.2 SNPs/gene ( , , ). ..

    Article Title: Molecular methods for somatic mutation testing in lung adenocarcinoma: EGFR and beyond
    Article Snippet: .. The Illumina Truseq Custom Amplicon Cancer Panel recommends 250 ng of input DNA, however results can be obtained with as little as 150 ng. ..

    Article Title: Prognostic signature and clonality pattern of recurrently mutated genes in inactive chronic lymphocytic leukemia
    Article Snippet: .. Targeted sequencing We designed a TruSeq Custom Amplicon panel (Illumina, Inc. San Diego, CA, USA) containing 13 genes and covering 28.099 bases ( ). .. For some genes known mutation hotspots were targeted; and for those with a widespread localization of the lesions, the entire coding sequence was analyzed.

    Article Title: Germline mutations in the alternative pathway of complement predispose to HELLP syndrome
    Article Snippet: .. A custom panel of 9 genes known to function in the APC was selected for sequencing using the Illumina TruSeq Custom Amplicon (v1.5). .. Illumina DesignStudio software was utilized to generate custom oligonucleotides designed to amplify exonic regions of the following selected genes: CFH , CFB , CFI , CFHR1 , CFHR3 , CFHR5 , C3 , CD46 ( MCP ), and THBD .

    Article Title: Role of molecular testing in the multidisciplinary diagnostic approach of ichthyosis
    Article Snippet: .. TruSeq Custom Amplicon ..

    Article Title: Elucidating the genetic architecture of Adams–Oliver syndrome in a large European cohort, et al. Elucidating the genetic architecture of Adams–Oliver syndrome in a large European cohort
    Article Snippet: .. The majority of the samples were sequenced by targeted next‐generation resequencing (n = 140) using either the HaloPlex Target Enrichment System (Agilent Technologies, Santa Clara, CA) as described previously (Meester et al., ), or a TruSeq Custom Amplicon Panel (Illumina, San Diego, CA) followed by sequencing on a MiSeq system (Illumina, San Diego, CA) with 150 bp paired‐end reads. .. Sequence data obtained from the TruSeq Custom Amplicon Panel were analyzed using Illumina's VariantStudio Data Analysis Software v3.0.

    Digital PCR:

    Article Title: Biased estimates of clonal evolution and subclonal heterogeneity can arise from PCR duplicates in deep sequencing experiments
    Article Snippet: .. Exome sequencing studies at moderate (approximately 100X) depth rely on read position to identify potential PCR duplicates [ ], but amplicon-based (molecular inversion probes [ ], RainDrop Digital PCR (RainDance Technologies, Billerica, MA, USA), TruSeq Custom Amplicon (Illumina, San Diego, CA, USA)) methods commonly used for targeted sequencing have reads with the same start and stop positions. .. Hybridization-based methods, when sequenced deeply, can result in reads that are not PCR duplicates but have the same start stop locations by chance [ ].

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  • About
  • News
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  • Team
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  • Contact
  • Bioz Stars
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  • 93
    Illumina Inc truseq custom amplicon low input library prep kit
    Truseq Custom Amplicon Low Input Library Prep Kit, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 2 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/truseq custom amplicon low input library prep kit/product/Illumina Inc
    Average 93 stars, based on 2 article reviews
    Price from $9.99 to $1999.99
    truseq custom amplicon low input library prep kit - by Bioz Stars, 2020-09
    93/100 stars
      Buy from Supplier

    91
    Illumina Inc truseq custom amplicon low input library
    Truseq Custom Amplicon Low Input Library, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 2 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/truseq custom amplicon low input library/product/Illumina Inc
    Average 91 stars, based on 2 article reviews
    Price from $9.99 to $1999.99
    truseq custom amplicon low input library - by Bioz Stars, 2020-09
    91/100 stars
      Buy from Supplier

    99
    Illumina Inc truseq custom amplicon low input technology
    Truseq Custom Amplicon Low Input Technology, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/truseq custom amplicon low input technology/product/Illumina Inc
    Average 99 stars, based on 1 article reviews
    Price from $9.99 to $1999.99
    truseq custom amplicon low input technology - by Bioz Stars, 2020-09
    99/100 stars
      Buy from Supplier

    96
    Illumina Inc truseq custom amplicon low input kit
    Truseq Custom Amplicon Low Input Kit, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 96/100, based on 20 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/truseq custom amplicon low input kit/product/Illumina Inc
    Average 96 stars, based on 20 article reviews
    Price from $9.99 to $1999.99
    truseq custom amplicon low input kit - by Bioz Stars, 2020-09
    96/100 stars
      Buy from Supplier

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