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Matrix Science peaklist
Peaklist, supplied by Matrix Science, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/peaklist/product/Matrix Science
Average 86 stars, based on 1 article reviews
Price from $9.99 to $1999.99
peaklist - by Bioz Stars, 2021-06
86/100 stars

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Related Articles

Sequencing:

Article Title: Modulation of Receptor Protein Tyrosine Phosphatase Sigma Increases Chondroitin Sulfate Proteoglycan Degradation through Cathepsin B Secretion to Enhance Axon Outgrowth
Article Snippet: Cell-strained CM was sent to for mass spectrometry analysis at the Case Western Reserve University Protein Core. .. Proteome Discoverer version 1.3.0.0339 (Thermo Fisher Scientific) was used to generate peaklist, Mascot version 2.3.00 (MatrixScience) as the search engine, Uniprot Rat Database (December 2012: 7844 sequences) used as the sequence database, and an expectation value of < 0.05 was accepted with an estimated false discovery rate of 4.45%. .. DRGs were cultured on poly-L-lysine, laminin/aggrecan-precoated 6-well plates with 1 ml media/well and immediately dosed with vehicle or peptides for 4 DIV.

Liquid Chromatography with Mass Spectroscopy:

Article Title: Label-free quantitative phosphoproteomic analysis reveals differentially regulated proteins and pathway in PRRSV-infected pulmonary alveolar macrophages.
Article Snippet: Porcine reproductive and respiratory syndrome virus (PRRSV) is an important pathogen of swine worldwide and causes significant economic losses. .. Porcine reproductive and respiratory syndrome virus (PRRSV) is an important pathogen of swine worldwide and causes significant economic losses. ..

Article Title: Discovery of Candidate Serum Proteomic and Metabolomic Biomarkers in Ankylosing Spondylitis *
Article Snippet: Peptides were detected and quantified with Progenesis LC-MS software (version 3.1.4003.30577) using default settings (no deconvolution/deisotoping, 200 most intense MS/MS peaks). .. A merged peaklist generated by Progenesis LC-MS was searched against the IPI human database (version.3.80, 86719 entries) using Mascot ( http://www.matrixscience.com/ ) version 2.3.01, allowing one missed cleavage and 20ppm/0.5 Da mass deviations in MS and MS/MS. .. Carbamidomethylation of cysteine was a fixed modification.

Article Title: Quantitative proteomics analysis of proteins involved in alkane uptake comparing the profiling of Pseudomonas aeruginosa SJTD-1 in response to n-octadecane and n-hexadecane
Article Snippet: The acquired MS raw data were loaded into Progenesis LC-MS (version 4.1, Nonlinear Dynamics, Newcastle, U.K.), and label free quantification was performed for each condition after peak detection, automatic retention time calibration, and normalization in Progenesis LC−MS. .. The peaklist was created by Progenesis LC-MS and searched in Mascot (version 2.4.1, Matrixscience, London, U.K.). ..

Generated:

Article Title: Quantitative Proteomics of Cerebrospinal Fluid in Paediatric Pneumococcal Meningitis
Article Snippet: .. A merged peaklist generated by Progenesis QI was searched against the database described in the section above, using MASCOT search engine (version 2.5.1, Matrix Science) and the same search parameters. ..

Article Title: Discovery of Candidate Serum Proteomic and Metabolomic Biomarkers in Ankylosing Spondylitis *
Article Snippet: Peptides were detected and quantified with Progenesis LC-MS software (version 3.1.4003.30577) using default settings (no deconvolution/deisotoping, 200 most intense MS/MS peaks). .. A merged peaklist generated by Progenesis LC-MS was searched against the IPI human database (version.3.80, 86719 entries) using Mascot ( http://www.matrixscience.com/ ) version 2.3.01, allowing one missed cleavage and 20ppm/0.5 Da mass deviations in MS and MS/MS. .. Carbamidomethylation of cysteine was a fixed modification.

Mass Spectrometry:

Article Title: Discovery of Candidate Serum Proteomic and Metabolomic Biomarkers in Ankylosing Spondylitis *
Article Snippet: Peptides were detected and quantified with Progenesis LC-MS software (version 3.1.4003.30577) using default settings (no deconvolution/deisotoping, 200 most intense MS/MS peaks). .. A merged peaklist generated by Progenesis LC-MS was searched against the IPI human database (version.3.80, 86719 entries) using Mascot ( http://www.matrixscience.com/ ) version 2.3.01, allowing one missed cleavage and 20ppm/0.5 Da mass deviations in MS and MS/MS. .. Carbamidomethylation of cysteine was a fixed modification.

Article Title: Diverse functions of myosin VI elucidated by an isoform-specific α-helix domain
Article Snippet: .. Data processing and protein quantitation analysis Raw MS files were converted into peaklist (.msm files); all MS/MS samples were analyzed using Mascot (Matrix Science, London, UK; version 2.3.02) set up with the following parameters: UniProt_CP_Human_20140416 database (88708 entries), Taxonomy Homo sapiens, enzyme Trypsin, maximum missed cleavages 2, fixed modification carbamidomethyl cysteine, variable modifications methionine oxidation and acetyl (protein N-terminus), peptide tolerance 10 ppm, MS/MS tolerance 0.5 Da, instrument ESI-TRAP. .. Interactomics results were generated with Scaffold_4.3.4 (Proteome Software Inc., Portland, OR) and protein quantitation was displayed as Total Spectral Count (best candidates are reported in ).

Tandem Mass Spectroscopy:

Article Title: Discovery of Candidate Serum Proteomic and Metabolomic Biomarkers in Ankylosing Spondylitis *
Article Snippet: Peptides were detected and quantified with Progenesis LC-MS software (version 3.1.4003.30577) using default settings (no deconvolution/deisotoping, 200 most intense MS/MS peaks). .. A merged peaklist generated by Progenesis LC-MS was searched against the IPI human database (version.3.80, 86719 entries) using Mascot ( http://www.matrixscience.com/ ) version 2.3.01, allowing one missed cleavage and 20ppm/0.5 Da mass deviations in MS and MS/MS. .. Carbamidomethylation of cysteine was a fixed modification.

Article Title: Diverse functions of myosin VI elucidated by an isoform-specific α-helix domain
Article Snippet: .. Data processing and protein quantitation analysis Raw MS files were converted into peaklist (.msm files); all MS/MS samples were analyzed using Mascot (Matrix Science, London, UK; version 2.3.02) set up with the following parameters: UniProt_CP_Human_20140416 database (88708 entries), Taxonomy Homo sapiens, enzyme Trypsin, maximum missed cleavages 2, fixed modification carbamidomethyl cysteine, variable modifications methionine oxidation and acetyl (protein N-terminus), peptide tolerance 10 ppm, MS/MS tolerance 0.5 Da, instrument ESI-TRAP. .. Interactomics results were generated with Scaffold_4.3.4 (Proteome Software Inc., Portland, OR) and protein quantitation was displayed as Total Spectral Count (best candidates are reported in ).

Protein Quantitation:

Article Title: Diverse functions of myosin VI elucidated by an isoform-specific α-helix domain
Article Snippet: .. Data processing and protein quantitation analysis Raw MS files were converted into peaklist (.msm files); all MS/MS samples were analyzed using Mascot (Matrix Science, London, UK; version 2.3.02) set up with the following parameters: UniProt_CP_Human_20140416 database (88708 entries), Taxonomy Homo sapiens, enzyme Trypsin, maximum missed cleavages 2, fixed modification carbamidomethyl cysteine, variable modifications methionine oxidation and acetyl (protein N-terminus), peptide tolerance 10 ppm, MS/MS tolerance 0.5 Da, instrument ESI-TRAP. .. Interactomics results were generated with Scaffold_4.3.4 (Proteome Software Inc., Portland, OR) and protein quantitation was displayed as Total Spectral Count (best candidates are reported in ).

Modification:

Article Title: Diverse functions of myosin VI elucidated by an isoform-specific α-helix domain
Article Snippet: .. Data processing and protein quantitation analysis Raw MS files were converted into peaklist (.msm files); all MS/MS samples were analyzed using Mascot (Matrix Science, London, UK; version 2.3.02) set up with the following parameters: UniProt_CP_Human_20140416 database (88708 entries), Taxonomy Homo sapiens, enzyme Trypsin, maximum missed cleavages 2, fixed modification carbamidomethyl cysteine, variable modifications methionine oxidation and acetyl (protein N-terminus), peptide tolerance 10 ppm, MS/MS tolerance 0.5 Da, instrument ESI-TRAP. .. Interactomics results were generated with Scaffold_4.3.4 (Proteome Software Inc., Portland, OR) and protein quantitation was displayed as Total Spectral Count (best candidates are reported in ).

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    Matrix Science ms ms peak lists
    Ms Ms Peak Lists, supplied by Matrix Science, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/ms ms peak lists/product/Matrix Science
    Average 86 stars, based on 1 article reviews
    Price from $9.99 to $1999.99
    ms ms peak lists - by Bioz Stars, 2021-06
    86/100 stars
      Buy from Supplier

    86
    Matrix Science peaklist
    Peaklist, supplied by Matrix Science, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/peaklist/product/Matrix Science
    Average 86 stars, based on 1 article reviews
    Price from $9.99 to $1999.99
    peaklist - by Bioz Stars, 2021-06
    86/100 stars
      Buy from Supplier

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