Journal: Virology Journal

Article Title: Case reports of persistent SARS-CoV-2 infection outline within-host viral evolution in immunocompromised patients

doi: 10.1186/s12985-024-02483-y

Figure Lengend Snippet: Phylogenetic tree obtained through the analysis of 201 SARS-CoV-2 sequences collected during 2022, including the considered cases at each time point. Patient A and B time points are highlighted with yellow and light green label background, respectively. Except for the analyzed cases, all samples are reported with an internal system ID, which consists of progressive numbering for each patient’s nasopharyngeal swab (NPS). Clades classification is provided by NextClade consensus sequence analysis report

Article Snippet: SARS-CoV-2 viral RNA was extracted from nasopharyngeal swabs using a manual QIAamp RNA viral kit (QIAGEN, Hilden, Germany).

Techniques: Sequencing