Journal: Theranostics
Article Title: Glucose homeostasis controls N-acetyltransferase 10-mediated ac4C modification of HK2 to drive gastric tumorigenesis
doi: 10.7150/thno.104310
Figure Lengend Snippet: NAT10-mediated ac4C modification of HK2 mRNA maintains its stability. (A) The distribution of ac4C-containing peaks across mRNAs in NAT10-overexpressing (left panel) and NAT10 knockout (right panel) GC cells is displayed in a metagene plot. (B) Representative pie chart of the peak distribution showing the proportions of total ac4C peaks in the indicated regions, including the 5′-untranslated region (5′-UTR), coding sequence (CDS), 3′- untranslated region (3′-UTR), start codon, and stop codon. (C) Consensus motif in AGS WT and NAT10-knockout cells identified by HOMER. (D) Venn diagram showing HK2 as the selected candidate target gene of NAT10. (E) The mRNA level of HK2 in NAT10-overexpressing and NAT10-KO GC cells was measured by qRT-PCR. (F) The protein level of HK2 in NAT10-overexpressing and NAT10-KO GC cells was measured by Western blotting. (G) Sections of xenograft tumors derived from NAT10-overexpressing (upper panel) and NAT10-knockdown (bottom panel) GC cells subcutaneously injected into nude mice were stained with an anti-HK2 antibody for IHC analysis (scale bars = 50 μm). (H) Sections of organoids formed from cells transduced with the NAT10 overexpression or control lentiviral vector were subjected to H&E staining or IHC staining with an anti-HK2 antibody (scale bars = 50 μm). (I) Sections of stomachs from NAT10 WT and cKO mice were stained with an anti-HK2 antibody for IHC analysis (scale bars = 100 μm). (J) Integrative Genomics Viewer (IGV) tracks revealing the ac4Cseq read distribution on HK2 mRNA in NAT10-overexpressing and NAT10-knockout GC cells. (K) acRIP-qPCR analysis was employed to demonstrate the presence of NAT10-mediated HK2 ac4C modifications. ac4C modification of HK2 was increased upon overexpression of NAT10, while it was decreased upon knockout of NAT10. (L) The level of HK2 expression in NAT10-overexpressing, NAT10-knockout and the corresponding control GC cells treated with actinomycin D (2 μg/mL) at the indicated time points was measured by qRT-PCR. (M) Schematic representation of the construction of the luciferase reporter vectors containing the HK2 WT, Mut1, Mut2, or Both Mut sequences (left panel). The relative luciferase activities of the HK2 WT, Mut1, Mut2, and Both Mut luciferase reporters in AGS cells with NAT10 knockout and the corresponding control cells were measured (right panel). H&E, haematoxylin and eosin; IHC, immunohistochemical; GC, gastric cancer; WT, wild type; KO, knockout. The statistical data in this figure are presented as the mean values ± SDs of three independent experiments. Statistical significance was determined by a two-tailed t test. * P < 0.05; ** P < 0.01; *** P < 0.001.
Article Snippet: siRNAs targeting NAT10 or HK2 were designed and synthesized by RiboBio (Guangzhou, China).
Techniques: Modification, Knock-Out, Sequencing, Quantitative RT-PCR, Western Blot, Derivative Assay, Knockdown, Injection, Staining, Transduction, Over Expression, Control, Plasmid Preparation, Immunohistochemistry, Expressing, Luciferase, Immunohistochemical staining, Two Tailed Test