r0131  (New England Biolabs)


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    Name:
    NheI
    Description:
    NheI 5 000 units
    Catalog Number:
    r0131l
    Price:
    282
    Size:
    5 000 units
    Category:
    Restriction Enzymes
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    Structured Review

    New England Biolabs r0131
    NheI
    NheI 5 000 units
    https://www.bioz.com/result/r0131/product/New England Biolabs
    Average 99 stars, based on 1 article reviews
    Price from $9.99 to $1999.99
    r0131 - by Bioz Stars, 2021-02
    99/100 stars

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    Clone Assay:

    Article Title: Design, Construction and Cloning of Truncated ORF2 and tPAsp-PADRE-Truncated ORF2 Gene Cassette From Hepatitis E Virus in the pVAX1 Expression Vector
    Article Snippet: .. Cloning of Codon-Optimized Truncated ORF2 (aa 112 - 660) Segment in pVAX1 Eukaryotic Expression Vector After cloning of the truncated ORF2 PCR product (without PADRE and tPAsp sequences) in the pVAX1 vector, the recombinant plasmids were detected by colony PCR and restriction enzyme digestion with NheI and XhoI enzymes (New England BioLabs, USA) ( ). .. DNA sequencing with the T7p and BGH primers (Bioneer, Korea) confirmed that the truncated ORF2 sequence had been cloned in the proper orientation and was 100% identical to the primary codon-optimized gene.

    Agarose Gel Electrophoresis:

    Article Title: Structures of Homologous Composite Transposons Carrying cbaABC Genes from Europe and North America
    Article Snippet: .. Plasmids were digested with restriction enzymes Eco RI, Hin dIII, Pst I, Not I, and Nhe I (New England Biolabs Inc., Beverly, Mass.) and were resolved by agarose gel electrophoresis. ..

    Polymerase Chain Reaction:

    Article Title: Design, Construction and Cloning of Truncated ORF2 and tPAsp-PADRE-Truncated ORF2 Gene Cassette From Hepatitis E Virus in the pVAX1 Expression Vector
    Article Snippet: .. Cloning of Codon-Optimized Truncated ORF2 (aa 112 - 660) Segment in pVAX1 Eukaryotic Expression Vector After cloning of the truncated ORF2 PCR product (without PADRE and tPAsp sequences) in the pVAX1 vector, the recombinant plasmids were detected by colony PCR and restriction enzyme digestion with NheI and XhoI enzymes (New England BioLabs, USA) ( ). .. DNA sequencing with the T7p and BGH primers (Bioneer, Korea) confirmed that the truncated ORF2 sequence had been cloned in the proper orientation and was 100% identical to the primary codon-optimized gene.

    Expressing:

    Article Title: Design, Construction and Cloning of Truncated ORF2 and tPAsp-PADRE-Truncated ORF2 Gene Cassette From Hepatitis E Virus in the pVAX1 Expression Vector
    Article Snippet: .. Cloning of Codon-Optimized Truncated ORF2 (aa 112 - 660) Segment in pVAX1 Eukaryotic Expression Vector After cloning of the truncated ORF2 PCR product (without PADRE and tPAsp sequences) in the pVAX1 vector, the recombinant plasmids were detected by colony PCR and restriction enzyme digestion with NheI and XhoI enzymes (New England BioLabs, USA) ( ). .. DNA sequencing with the T7p and BGH primers (Bioneer, Korea) confirmed that the truncated ORF2 sequence had been cloned in the proper orientation and was 100% identical to the primary codon-optimized gene.

    Sequencing:

    Article Title: Cloning of fliC Gene From Salmonella typhimurium in the Expression Vector pVAX1 and Evaluation of its Expression in Eukaryotic Cells
    Article Snippet: .. The recombinant plasmids were detected by restriction digestion with NheI and XhoI enzymes (New England BioLabs, USA) and confirmed by sequence analysis (Bioneer, Korea). .. Subcloning in pVAX1 Eukaryotic Expression Vector The recombinant plasmid pPrime-fliC and eukaryotic expression vector pVAX1 (Invitrogen, Carlsbad, CA, USA) were digested by XhoI and NheI enzymes (New England BioLabs, USA) at 37˚C for 16 hours.

    Recombinant:

    Article Title: Design, Construction and Cloning of Truncated ORF2 and tPAsp-PADRE-Truncated ORF2 Gene Cassette From Hepatitis E Virus in the pVAX1 Expression Vector
    Article Snippet: .. Cloning of Codon-Optimized Truncated ORF2 (aa 112 - 660) Segment in pVAX1 Eukaryotic Expression Vector After cloning of the truncated ORF2 PCR product (without PADRE and tPAsp sequences) in the pVAX1 vector, the recombinant plasmids were detected by colony PCR and restriction enzyme digestion with NheI and XhoI enzymes (New England BioLabs, USA) ( ). .. DNA sequencing with the T7p and BGH primers (Bioneer, Korea) confirmed that the truncated ORF2 sequence had been cloned in the proper orientation and was 100% identical to the primary codon-optimized gene.

    Article Title: Cloning of fliC Gene From Salmonella typhimurium in the Expression Vector pVAX1 and Evaluation of its Expression in Eukaryotic Cells
    Article Snippet: .. The recombinant plasmids were detected by restriction digestion with NheI and XhoI enzymes (New England BioLabs, USA) and confirmed by sequence analysis (Bioneer, Korea). .. Subcloning in pVAX1 Eukaryotic Expression Vector The recombinant plasmid pPrime-fliC and eukaryotic expression vector pVAX1 (Invitrogen, Carlsbad, CA, USA) were digested by XhoI and NheI enzymes (New England BioLabs, USA) at 37˚C for 16 hours.

    Plasmid Preparation:

    Article Title: Design, Construction and Cloning of Truncated ORF2 and tPAsp-PADRE-Truncated ORF2 Gene Cassette From Hepatitis E Virus in the pVAX1 Expression Vector
    Article Snippet: .. Cloning of Codon-Optimized Truncated ORF2 (aa 112 - 660) Segment in pVAX1 Eukaryotic Expression Vector After cloning of the truncated ORF2 PCR product (without PADRE and tPAsp sequences) in the pVAX1 vector, the recombinant plasmids were detected by colony PCR and restriction enzyme digestion with NheI and XhoI enzymes (New England BioLabs, USA) ( ). .. DNA sequencing with the T7p and BGH primers (Bioneer, Korea) confirmed that the truncated ORF2 sequence had been cloned in the proper orientation and was 100% identical to the primary codon-optimized gene.

    Article Title: A streamlined method for the design and cloning of shRNAs into an optimized Dox-inducible lentiviral vector
    Article Snippet: .. Vector digest and PEG precipitation Vector can be prepared by co-digesting EZ-Tet-pLKO-Puro DNA with NheI and EcoRI (NEB). .. A typical digest consisted of 5 μg of vector DNA with 20 u of each enzyme in a 50 μL digest volume for at least 3 h at 37 °C.

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    New England Biolabs nhei
    Dendrogram based on <t>NheI</t> PFGE patterns of the genomic <t>DNA</t> of 25 ciprofloxacin-resistant N. gonorrhoeae isolates from Rio de Janeiro, Brazil. Abbreviations: PPNG, penicillinase-producing N. gonorrhoeae ; TRNG, plasmid-mediated tetracycline resistance; CMRP,
    Nhei, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 99/100, based on 222 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/nhei/product/New England Biolabs
    Average 99 stars, based on 222 article reviews
    Price from $9.99 to $1999.99
    nhei - by Bioz Stars, 2021-02
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    Dendrogram based on NheI PFGE patterns of the genomic DNA of 25 ciprofloxacin-resistant N. gonorrhoeae isolates from Rio de Janeiro, Brazil. Abbreviations: PPNG, penicillinase-producing N. gonorrhoeae ; TRNG, plasmid-mediated tetracycline resistance; CMRP,

    Journal: Journal of Clinical Microbiology

    Article Title: Molecular Characterization of Quinolone-Resistant Neisseria gonorrhoeae Isolates from Brazil ▿

    doi: 10.1128/JCM.01175-11

    Figure Lengend Snippet: Dendrogram based on NheI PFGE patterns of the genomic DNA of 25 ciprofloxacin-resistant N. gonorrhoeae isolates from Rio de Janeiro, Brazil. Abbreviations: PPNG, penicillinase-producing N. gonorrhoeae ; TRNG, plasmid-mediated tetracycline resistance; CMRP,

    Article Snippet: Subsequently, each DNA preparation was digested with NheI (New England Biolabs, Ipswich, MA) overnight at 37°C in 100 μl of restriction endonuclease buffer containing 15 U of the enzyme.

    Techniques: Plasmid Preparation

    A, Sub-cloning Results of Optimized tPA sp -PADRE-Truncated ORF2 (aa 112 - 660) Gene Cassette In Pvax1 Eukaryotic Plasmid; Lane M, 1kb DNA marker; Lane 1, pBMH-tPA sp -PADRE-truncated ORF2 plasmid; Lane 2, digested pBMH-tPA sp -PADRE-truncated ORF2 plasmid by NheI restriction enzyme; Lane 3, digested pBMH-tPA sp -PADRE-truncated ORF2 plasmid by NheI and XhoI restriction enzymes and production of two expected fragments, a 2900-bp and a 1795-bp fragment; Lane 4, pVAX plasmid; Lane 5, digested pVAX plasmid by NheI and XhoI restriction enzymes and production of 2909-bp band; Lane 6, pVAX-tPA sp -PADRE-truncated ORF2 plasmid; Lane 7, digested pVAX-tPA sp -PADRE-truncated ORF2 plasmid by the NheI restriction enzyme; Lane 8, digested pVAX-tPA sp -PADRE-truncated ORF2 plasmid by NheI and XhoI restriction enzymes and production of two expected fragments, a 2909-bp and a 1795-bp fragment; Lane 9, 1876-bp band in colony PCR test with T7 and BHG universal primers; B, Restriction Enzyme analyses and colony polymerase chain reaction results of three colonies containing pVAX-tPA sp -PADRE-truncated ORF2 plasmid; Lane M, 1 kb DNA marker; Lane 1, negative control; Lanes 2 - 4, 1876-bp band in colony PCR test; Lanes 5 - 7, digested pVAX-tPA sp -PADRE-truncated ORF2 (aa 112 - 660) -linker plasmid by NheI and XhoI restriction enzymes and production of two expected fragments, a 2909-bp and a 1795-bp fragment

    Journal: Jundishapur Journal of Microbiology

    Article Title: Design, Construction and Cloning of Truncated ORF2 and tPAsp-PADRE-Truncated ORF2 Gene Cassette From Hepatitis E Virus in the pVAX1 Expression Vector

    doi: 10.5812/jjm.26035

    Figure Lengend Snippet: A, Sub-cloning Results of Optimized tPA sp -PADRE-Truncated ORF2 (aa 112 - 660) Gene Cassette In Pvax1 Eukaryotic Plasmid; Lane M, 1kb DNA marker; Lane 1, pBMH-tPA sp -PADRE-truncated ORF2 plasmid; Lane 2, digested pBMH-tPA sp -PADRE-truncated ORF2 plasmid by NheI restriction enzyme; Lane 3, digested pBMH-tPA sp -PADRE-truncated ORF2 plasmid by NheI and XhoI restriction enzymes and production of two expected fragments, a 2900-bp and a 1795-bp fragment; Lane 4, pVAX plasmid; Lane 5, digested pVAX plasmid by NheI and XhoI restriction enzymes and production of 2909-bp band; Lane 6, pVAX-tPA sp -PADRE-truncated ORF2 plasmid; Lane 7, digested pVAX-tPA sp -PADRE-truncated ORF2 plasmid by the NheI restriction enzyme; Lane 8, digested pVAX-tPA sp -PADRE-truncated ORF2 plasmid by NheI and XhoI restriction enzymes and production of two expected fragments, a 2909-bp and a 1795-bp fragment; Lane 9, 1876-bp band in colony PCR test with T7 and BHG universal primers; B, Restriction Enzyme analyses and colony polymerase chain reaction results of three colonies containing pVAX-tPA sp -PADRE-truncated ORF2 plasmid; Lane M, 1 kb DNA marker; Lane 1, negative control; Lanes 2 - 4, 1876-bp band in colony PCR test; Lanes 5 - 7, digested pVAX-tPA sp -PADRE-truncated ORF2 (aa 112 - 660) -linker plasmid by NheI and XhoI restriction enzymes and production of two expected fragments, a 2909-bp and a 1795-bp fragment

    Article Snippet: Cloning of Codon-Optimized Truncated ORF2 (aa 112 - 660) Segment in pVAX1 Eukaryotic Expression Vector After cloning of the truncated ORF2 PCR product (without PADRE and tPAsp sequences) in the pVAX1 vector, the recombinant plasmids were detected by colony PCR and restriction enzyme digestion with NheI and XhoI enzymes (New England BioLabs, USA) ( ).

    Techniques: Subcloning, Plasmid Preparation, Marker, Polymerase Chain Reaction, Negative Control

    A, Polymerase Chain Reaction Results of pVAX-Truncated ORF2 (aa 112 - 660) Expression Plasmid (without PADRE and tPA sp sequences); Lane M, 1 kb DNA marker; Lane 1, pVAX-truncated ORF2 (aa 112 - 660) plasmid; Lane 2, digested pVAX-truncated ORF2 (aa 112 - 660) plasmid by NheI restriction enzyme (4596 bp fragment); Lanes 3, digested pVAX-truncated ORF2 (112 - 660) plasmid by NheI and XhoI restriction enzymes and production of two expected fragments, a 2909-bp and a 1693-bp fragment; Lanes 4, PCR product of truncated ORF2 (aa 112-660) gene (without PADRE and tPA sp sequences) with specific primers (1710 bp); Lanes 4, PCR product of tPA sp -PADRE-ORF2 (aa 112 - 660) gene (with PADRE and tPA sp sequences) with T7p and BGH primers (1876 bp); B, Colony Polymerase Chain Reaction Results of Colonies Containing the pVAX-Truncated ORF2 (aa 112 - 660) Expression Recombinant Plasmid; Lane M, 1 kb DNA marker; Lane 1, negative control; Lanes 2 - 9, 1774 bp band of pVAX-truncated ORF2 (aa 112 - 660) plasmid (without PADRE and tPA sp sequences) due to colony PCR assay with T7p and BGH universal primers; Lane 2, 1876 bp band of pVAX-tPA sp -PADRE-ORF2 (aa 112 - 660) plasmid (with PADRE and tPA sp sequences) due to colony PCR assay with T7p and BGH primers as controls

    Journal: Jundishapur Journal of Microbiology

    Article Title: Design, Construction and Cloning of Truncated ORF2 and tPAsp-PADRE-Truncated ORF2 Gene Cassette From Hepatitis E Virus in the pVAX1 Expression Vector

    doi: 10.5812/jjm.26035

    Figure Lengend Snippet: A, Polymerase Chain Reaction Results of pVAX-Truncated ORF2 (aa 112 - 660) Expression Plasmid (without PADRE and tPA sp sequences); Lane M, 1 kb DNA marker; Lane 1, pVAX-truncated ORF2 (aa 112 - 660) plasmid; Lane 2, digested pVAX-truncated ORF2 (aa 112 - 660) plasmid by NheI restriction enzyme (4596 bp fragment); Lanes 3, digested pVAX-truncated ORF2 (112 - 660) plasmid by NheI and XhoI restriction enzymes and production of two expected fragments, a 2909-bp and a 1693-bp fragment; Lanes 4, PCR product of truncated ORF2 (aa 112-660) gene (without PADRE and tPA sp sequences) with specific primers (1710 bp); Lanes 4, PCR product of tPA sp -PADRE-ORF2 (aa 112 - 660) gene (with PADRE and tPA sp sequences) with T7p and BGH primers (1876 bp); B, Colony Polymerase Chain Reaction Results of Colonies Containing the pVAX-Truncated ORF2 (aa 112 - 660) Expression Recombinant Plasmid; Lane M, 1 kb DNA marker; Lane 1, negative control; Lanes 2 - 9, 1774 bp band of pVAX-truncated ORF2 (aa 112 - 660) plasmid (without PADRE and tPA sp sequences) due to colony PCR assay with T7p and BGH universal primers; Lane 2, 1876 bp band of pVAX-tPA sp -PADRE-ORF2 (aa 112 - 660) plasmid (with PADRE and tPA sp sequences) due to colony PCR assay with T7p and BGH primers as controls

    Article Snippet: Cloning of Codon-Optimized Truncated ORF2 (aa 112 - 660) Segment in pVAX1 Eukaryotic Expression Vector After cloning of the truncated ORF2 PCR product (without PADRE and tPAsp sequences) in the pVAX1 vector, the recombinant plasmids were detected by colony PCR and restriction enzyme digestion with NheI and XhoI enzymes (New England BioLabs, USA) ( ).

    Techniques: Polymerase Chain Reaction, Expressing, Plasmid Preparation, Marker, Recombinant, Negative Control

    Vector maps and PEG purification. a Basic vector maps (not to scale) for the original Tet-pLKO-Puro vector and our modified versions. b Agarose gel electrophoresis comparing DNA precipitation methods. 10 μg of EZ-Tet-pLKO vector DNA was co-digested with NheI + EcoRI. The digest was split into three 3 μg aliquots and precipitated with isopropanol (Iso) or polyethylene glycol (PEG) at 6 or 8% concentration. 1 μg of control DNA (uncut and cut) was run alongside 1/3 of the precipitated DNA samples

    Journal: BMC Biotechnology

    Article Title: A streamlined method for the design and cloning of shRNAs into an optimized Dox-inducible lentiviral vector

    doi: 10.1186/s12896-017-0341-x

    Figure Lengend Snippet: Vector maps and PEG purification. a Basic vector maps (not to scale) for the original Tet-pLKO-Puro vector and our modified versions. b Agarose gel electrophoresis comparing DNA precipitation methods. 10 μg of EZ-Tet-pLKO vector DNA was co-digested with NheI + EcoRI. The digest was split into three 3 μg aliquots and precipitated with isopropanol (Iso) or polyethylene glycol (PEG) at 6 or 8% concentration. 1 μg of control DNA (uncut and cut) was run alongside 1/3 of the precipitated DNA samples

    Article Snippet: Vector digest and PEG precipitation Vector can be prepared by co-digesting EZ-Tet-pLKO-Puro DNA with NheI and EcoRI (NEB).

    Techniques: Plasmid Preparation, Purification, Modification, Agarose Gel Electrophoresis, Concentration Assay

    Electrophoresis of pPrime- fliC Recombinant Plasmids From White Colonies on 1% Agarose Gel Lane 1 to 6: extracted Pprime- fliC plasmids; Lane 8 to 13: Pprime- fliC plasmids digested by XhoI; Lane 15 to 20: Pprime- fliC plasmids digested by XhoI and NheI; Lane 7 and 14: 1 Kbp DNA ladder vivantis.

    Journal: Jundishapur Journal of Microbiology

    Article Title: Cloning of fliC Gene From Salmonella typhimurium in the Expression Vector pVAX1 and Evaluation of its Expression in Eukaryotic Cells

    doi: 10.5812/jjm.12351

    Figure Lengend Snippet: Electrophoresis of pPrime- fliC Recombinant Plasmids From White Colonies on 1% Agarose Gel Lane 1 to 6: extracted Pprime- fliC plasmids; Lane 8 to 13: Pprime- fliC plasmids digested by XhoI; Lane 15 to 20: Pprime- fliC plasmids digested by XhoI and NheI; Lane 7 and 14: 1 Kbp DNA ladder vivantis.

    Article Snippet: The recombinant plasmids were detected by restriction digestion with NheI and XhoI enzymes (New England BioLabs, USA) and confirmed by sequence analysis (Bioneer, Korea).

    Techniques: Electrophoresis, Recombinant, Agarose Gel Electrophoresis

    AgaroseGel Electrophoresis of Restriction Enzyme Digestion of Purified pVAX- fliC Recombinant Plasmid Lane 1: pVAX- fliC plasmid digested by XhoI had one band (4419 bp); Lane 2: Double Digestion by NheI and XhoI on pVAX- fliC plasmid had two bands that were 1509 bp (down) and 2910 bp (up); Lane 3: 1 Kbp DNA ladder Vivantis.

    Journal: Jundishapur Journal of Microbiology

    Article Title: Cloning of fliC Gene From Salmonella typhimurium in the Expression Vector pVAX1 and Evaluation of its Expression in Eukaryotic Cells

    doi: 10.5812/jjm.12351

    Figure Lengend Snippet: AgaroseGel Electrophoresis of Restriction Enzyme Digestion of Purified pVAX- fliC Recombinant Plasmid Lane 1: pVAX- fliC plasmid digested by XhoI had one band (4419 bp); Lane 2: Double Digestion by NheI and XhoI on pVAX- fliC plasmid had two bands that were 1509 bp (down) and 2910 bp (up); Lane 3: 1 Kbp DNA ladder Vivantis.

    Article Snippet: The recombinant plasmids were detected by restriction digestion with NheI and XhoI enzymes (New England BioLabs, USA) and confirmed by sequence analysis (Bioneer, Korea).

    Techniques: Electrophoresis, Purification, Recombinant, Plasmid Preparation